| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02930 |
|---|
| Symbol | |
|---|
| ID | 6778773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 3180427 |
|---|
| End bp | 3181173 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 642756379 |
|---|
| Product | chemotaxis protein |
|---|
| Protein accession | YP_002127220 |
|---|
| Protein GI | 196157731 |
|---|
| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0835] Chemotaxis signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.464973 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACATA TTCGTGGGCA AACTATTTCA GTTATCGACT TAAGCATGGC AACGAGAGGC
CGACGGATTG AGGACCTTTC TAATGCCTTT ATCGTTATCG CAGAATACAA TCGTTCGGTG
CAGGGGTTCT TAGTGGGCGC TGTGGAACGT ATTATAAATA CCAACTGGGA CGCAATTATG
CCTCCTCCAC AAGGTACGGG GCGAGCAAGT TACTTAACCG CGGTTACTGA AGTTGAAAAT
GAATTGATTG AGATCCTTGA TGTAGAAAAA ATTCTCAATG AAATTTCGCC GCTTAATGCA
GAAGTAAGTA CTGAGGTAGC TGAAGGCTTA ACCACAGAGG GCCAAGAAAA TAAGATTATC
TTTATTGCAG ATGATTCTTC AGTGGCTCGA AATCAGGTTA AAAAAGCATT AACGTCGCTT
GGCCTTGAAA TTGAGCTTGC GAAAAACGGC TTAGAGGCTT TGAAACGGTT GAAAGAAATC
GCTGAAGAGT ATGGCGATGT AACTAACCGT GTTGGGGTTT TAGTGTCTGA TATTGAGATG
CCGGAAATGG ATGGTTATAC GCTGACGGCG GAAATAAAAA ATACGCCGGA ATTGCAGAAG
CTTCACGTCG TGCTCCACAC TTCACTTAGT GGTGTATTTA ACCAAGCAAT GGTACAGAAA
GTCGGCGCTG ATGACTTTAT CGCAAAATTT CATCCTGATG AGCTTGCGAC CGCAGTACAA
AAATGGCTAA TGACAGAGTG CGAATAA
|
|---|
| Protein sequence | MAHIRGQTIS VIDLSMATRG RRIEDLSNAF IVIAEYNRSV QGFLVGAVER IINTNWDAIM
PPPQGTGRAS YLTAVTEVEN ELIEILDVEK ILNEISPLNA EVSTEVAEGL TTEGQENKII
FIADDSSVAR NQVKKALTSL GLEIELAKNG LEALKRLKEI AEEYGDVTNR VGVLVSDIEM
PEMDGYTLTA EIKNTPELQK LHVVLHTSLS GVFNQAMVQK VGADDFIAKF HPDELATAVQ
KWLMTECE
|
|---|
| |