Gene MADE_02926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02926 
SymbolflgD 
ID6778928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp3177807 
End bp3178493 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content44% 
IMG OID642756375 
Productflagellar basal body rod modification protein 
Protein accessionYP_002127216 
Protein GI196157727 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0594334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACCA TAAACAATAC TGGCTTAAAT ACTGATCTGT ATTGGCAAGA GGAAACCGTC 
AAAATAGCTG ACGGCACCGA GCAGCAGTTA ACCCAGGAAG ATTTCTTCTC AATGTTAACT 
GAGCAGTTAG CCAATCAGGA TCCCACTGCA CCCGTTGATA ACGATCAAAT GGTAGCGCAG 
ATGACATCAT TTACGATGGC CGACGGTATT TCCCAGCTTA ACGAAAAGTT TGAGTCGTTT 
GCAGCTTCAA TGACATCGAA TCAAGCGTTA CAAGCTTCTA GTCTTATCGG GCAAAACGTG 
CTGGTTCAAG GTAACGTGGG TTATATGGCC AATGAAGGCG ATGGCATTTC GGGTGTCATC 
GTGAATGAAA AAACAGTTCA GAATATGACG ATCACTATTG AGAACCAGTT TGGTGAAGTC 
ATAAAAACCA TTGATGCAGG CACACAAAGC GCTGGCAACA TTGAGTTTGA ATGGGATGGC 
AAAGATAAGC ATGGCAACCA GATGGCACCG GGTGAATATG TTATCAGTGC CACTGGCGAG 
TTGAATGGAG AAGGTGTTCA GCTGAATACC GCCGTTAATC GCCATGTTGG AAGTGTAAGC 
TTGGCTGGTA GTGGTCAAGG CGTAATTTTG AATTTGGATG GTGATGTCAG TATCAATCTT 
GATGACGTCA TTCAAATCGG CAGTTAG
 
Protein sequence
MNTINNTGLN TDLYWQEETV KIADGTEQQL TQEDFFSMLT EQLANQDPTA PVDNDQMVAQ 
MTSFTMADGI SQLNEKFESF AASMTSNQAL QASSLIGQNV LVQGNVGYMA NEGDGISGVI 
VNEKTVQNMT ITIENQFGEV IKTIDAGTQS AGNIEFEWDG KDKHGNQMAP GEYVISATGE 
LNGEGVQLNT AVNRHVGSVS LAGSGQGVIL NLDGDVSINL DDVIQIGS