| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02914 |
|---|
| Symbol | |
|---|
| ID | 6779177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 3163518 |
|---|
| End bp | 3164933 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 642756363 |
|---|
| Product | Flagellar capping protein |
|---|
| Protein accession | YP_002127204 |
|---|
| Protein GI | 196157715 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1345] Flagellar capping protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0732535 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACTA TAACAAATGC TGGCGTTGGG TCGGGCTTGG ACCTAGAAGC CATTATTTCT
GCAACTCTAC AAGCCTCCAA TCAGCCAAAG CTTCAAAAGT TTGCTTCTCG AGAATCTGAG
TTGGAAGTTC AGCTCACAGG TATTGGTGGA ATTAAGTCAG TTATGAGCAA GCTTCAAGAT
GTTTTTGAAG AGCTTGCTTC CCCAGAAGAG TTCAACCAAA GAGTCGCTAG CGTTCGCCAA
CCTAGTAATT CAGCAGAATT AGGTGATCTT GTTTCGGTTA GTTCAGATAA AACTGCTACT
ACAGGGGCAT TTGAAATCAA TGTATTGCAA CTAGCCAAGG GCAGCCGCGC ACAAACAGAC
GCAACAAACC CAGCAAACGC ATTTAATTCG GCTGATGAAG TTGTCACAAC TTCCGCTGGT
ATTTTAACAT TTACAGCGGG TGAAAATTCA TTTGATATCG ACATAGAAGC TGGTTCCACA
TTGGAAGATA TTCGCCAAGC TATTAATAGT GACTCATCAT CCGGTATCTC TGCCAATATT
ATCAACACAG GAACTCAGAC TTTACTGGTT ATAGAAGCTG CAGAAACCGG GAGTGGTAAC
GATTTAGTTA TCACAAACAA CAACGCAGAA CTAGACAGAC TGTCTACTGT TGCAAACGGT
GGTGGAGCTG GAGGGTTGGA AATTGGTGCT GAAGACCAAG CCCAAGATGC GATAATTGAA
GTTGACGGAA TCCAAATTAG TAACACAAGT AACGTTTTTA GTAATGCTGT ACAAGGTTTG
ACCATAACAG CAGAAAGACA AAGCGAAACG AACGAAACTG CAAATGTTAA TGTTGCCTTT
GATAGAGAAG GGGTCACTGA AAAGATTGAT GAATTTATTT CTGCATTCAA CAACACAATC
GATATGATTG GACAACAGTC TTCTGCAGTA AGCTCTCCTC TGTTCGGAGA TGCTACCGTA
CGCGCTATAA AAGATCAGCT AACTAACGCG CTAACTACAA CGGTTGGAAA CGCAGGAGAC
TTTGAGACCA TTTTTGACAT AGGTTTATCC TTGAATGAAA ACGGTAAGTT AGAAAAGGAA
AACGTTGTTA GAAGTTTAAG TGAAGCATTA GACACGAACT TTTCGGATAT TGGTAAGTTA
TTTACGAATC CCGGAGGTAT TGCTGATACT TTTGGAAGTA TATTGGAAAA CTATGTGGAT
TCGTCAGGCG TATTAAAACA GCGCCAAGAT ATTTTGAACC TTCAGAAAGA CGACCTTGAG
GATGACCGAC TGGATCATCA ATTTCGAATG GAGCAACTTG AATCCAGTTT GCGAAAGAAA
TATGCATCAC TAGATACACT GATAGCTTCG ATGAGAAGTT CGGGCGATTA CTTAATGGGG
CAATTGAGTT CCTTACCCGG TTTTACTCGA GAATAG
|
|---|
| Protein sequence | MATITNAGVG SGLDLEAIIS ATLQASNQPK LQKFASRESE LEVQLTGIGG IKSVMSKLQD
VFEELASPEE FNQRVASVRQ PSNSAELGDL VSVSSDKTAT TGAFEINVLQ LAKGSRAQTD
ATNPANAFNS ADEVVTTSAG ILTFTAGENS FDIDIEAGST LEDIRQAINS DSSSGISANI
INTGTQTLLV IEAAETGSGN DLVITNNNAE LDRLSTVANG GGAGGLEIGA EDQAQDAIIE
VDGIQISNTS NVFSNAVQGL TITAERQSET NETANVNVAF DREGVTEKID EFISAFNNTI
DMIGQQSSAV SSPLFGDATV RAIKDQLTNA LTTTVGNAGD FETIFDIGLS LNENGKLEKE
NVVRSLSEAL DTNFSDIGKL FTNPGGIADT FGSILENYVD SSGVLKQRQD ILNLQKDDLE
DDRLDHQFRM EQLESSLRKK YASLDTLIAS MRSSGDYLMG QLSSLPGFTR E
|
|---|
| |