Gene MADE_02896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02896 
Symbol 
ID6776882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp3146585 
End bp3147583 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content40% 
IMG OID642756345 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_002127186 
Protein GI196157697 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1086] Predicted nucleoside-diphosphate sugar epimerases 
TIGRFAM ID[TIGR03589] UDP-N-acetylglucosamine 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGATG GCAAATCAAT ACTGATTACT GGTGGAACAG GTTCGTTCGG CCACAAATAT 
ACCGAAACAC TTTTAGCTAA GTACAAACCG AAACGTTTGA TTATATATTC TCGTGATGAA 
TTAAAACAAT TTGAAATGCA ACAAAAGTTT AACTCTAACT GCATGCGTTA TTTTGTTGGT 
GATGTTAGGG ATAGGGATCG CCTAACGAGA GCTATGCAAG GTGTTGATTT TGTAATACAT 
GCTGCTGCTA TGAAGCAGGT TCCGGCTGCC GAATATAATC CTACCGAATG TATTCGAACC 
AACATAGATG GTGCAGAAAA CGTTATTAAC GCCGCAATCG ACAATAATGT AAGCAAGGTG 
ATTGCATTAT CTACAGACAA AGCTGCTAAC CCTGTCAATC TTTACGGTGC GACTAAATTA 
GCTTCTGACA AACTTTTTGT CGCAGCCAAT AATATGGTGG GGGCGAGGAA ACCCAGGTTT 
TCGGTGGTTC GATACGGTAA CGTAGTTGGG TCAAGAGGAT CCGTTGTACC CTTTTTCAGA 
AGCTTAATAG GGGAAGGCAC TGATCATATA CCTATTACAC ATCAGAATAT GACGAGATTT 
TGGATAACAC TTCAACAAGG GGTGGATTTC GTCTTAAAGA ACTTTGAGCG TATGCTCGGC 
GGCGAAATTT TCGTTCCAAA GATTCCGTCT ATCCGAATTA CAGATTTAGC AAAAGCCATG 
GCACCAGAAA TTCCGGTTAA AATTGTAGGT GTTCGTCCAG GTGAGAAACT TCACGAGATG 
ATGTGCCCAG GTGATATGGC ATTCCATACG TTTGAATATG AAGACCATTA TGTCATTGCA 
CCAGCAATAA AGTTTTTTAA TAGAAGTAAT GATTTTAAGA CTAACGCTCT CGGAGAAAAA 
GGAAATGCAG TGATTGAAGG TTTTGAATAC GTTTCAGACA CAAACCCACA TTTCCTTACG 
GTAGATGAAA TCTCTTCGTT TGATCGGGAA GAGAAGTAA
 
Protein sequence
MFDGKSILIT GGTGSFGHKY TETLLAKYKP KRLIIYSRDE LKQFEMQQKF NSNCMRYFVG 
DVRDRDRLTR AMQGVDFVIH AAAMKQVPAA EYNPTECIRT NIDGAENVIN AAIDNNVSKV 
IALSTDKAAN PVNLYGATKL ASDKLFVAAN NMVGARKPRF SVVRYGNVVG SRGSVVPFFR 
SLIGEGTDHI PITHQNMTRF WITLQQGVDF VLKNFERMLG GEIFVPKIPS IRITDLAKAM 
APEIPVKIVG VRPGEKLHEM MCPGDMAFHT FEYEDHYVIA PAIKFFNRSN DFKTNALGEK 
GNAVIEGFEY VSDTNPHFLT VDEISSFDRE EK