Gene MADE_02890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02890 
Symbol 
ID6775404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3140679 
End bp3141047 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content41% 
IMG OID642756339 
ProductFlagellar hook-basal body protein 
Protein accessionYP_002127180 
Protein GI196157691 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCGGTAA ATGAAGAAAC ACTAGGAGTG GTTATGGACG TTAAAGCCAA CAGTTTGTAT 
CAAGAAATGC AAAATATGAT CGGGCAAACT CGTCTTCAAG TTAATGAACC TCAACAGCAA
TCGCTTAATG AGATCAATAC CTCTGCAAGT GACTTCTCGA CCATGCTAAA AAATGCGGTT
GATGGCGTGA ATAATATGCA GCTAGAGTCA AAAGATGTGC AGCAACGTTT TGAGATGGGT
GACCCTAGTC TAAGTTTGGC GCAGGTTATG TTAACTAAAG AAAAATCGGG CATTGCCTTT
GAGGCAACTG TTCAGGTACG AAATAAAGTA CTTGAAGCCT ATAAAACAAT AATGAACATG
CCGGTGTAG
 
Protein sequence
MPVNEETLGV VMDVKANSLY QEMQNMIGQT RLQVNEPQQQ SLNEINTSAS DFSTMLKNAV 
DGVNNMQLES KDVQQRFEMG DPSLSLAQVM LTKEKSGIAF EATVQVRNKV LEAYKTIMNM
PV