Gene MADE_02887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02887 
SymbolfliH 
ID6776665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3137082 
End bp3137864 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content47% 
IMG OID642756336 
Productflagellar assembly protein H 
Protein accessionYP_002127177 
Protein GI196157688 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1317] Flagellar biosynthesis/type III secretory pathway protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGTA ATAAAAGTTT CAGTGAACAC GAAATAAGTG AAGCGAAGAA GTGGGATTTA 
CCCTTCGTAG ACGACGCGAC CGCGCCTAGG AAAGATGAGC CAACTAACGC CTTAAATAAA
CGTTCTGATT GGAAGTACGA GCCTCCTGAA GTGGAAGAGG AAATACTTCC ACCCACTGCC
GAAGAAATTG AAGCTATACG ACAGGCAGCC TATGACGAAG GGTATCTAGA AGGCAAGGAA
AAAGGGTTTG AAGAGGGCAA AACAGAGGGG CTTGAAACAG GGCTTAGTGA AGGCCAAGAA
CAGGGCCATG CCAAAGGGCT TGAACAAGGC TTAGATGAAG GCCGTCAGCA AATGGCTACC
CAGGCAGAAG TGTGGCAAAT GCTTGCGGAC AAACTTCACG ATCCACTCTC ACAAGCCAAT
GATGAAACTC GCGACCAACT GGTTAAACTT GCGGTTACGC TTGCAAAGTC AGTTATTAAG
GTAGAGGTAA GCACTAACCA ACAGGTTATT CTGCAAGCGC TAAGTGAAGG CATAAAAGCC
CTTCCTATTA ATCAAACCGA ATACCAAATT CATATGCACC CTGACGATAT TGCATTGGTT
AATGCGCACT TTGGTGACGA AGAAATGTCC AAAAAAGGCT GGAATTTGGT GGAGGCTCCC
GCCATGGAAA GGGGCGGGTG TGATATTACC ACGGTGCACA ATGCCGTTGA TGTGTCGATT
GAGCGCCGTT GCCGTGATGT TATTGAAAAA TTTTTGCTAA ACCAAGGGCT ATCCGATGAC
TAG
 
Protein sequence
MTGNKSFSEH EISEAKKWDL PFVDDATAPR KDEPTNALNK RSDWKYEPPE VEEEILPPTA 
EEIEAIRQAA YDEGYLEGKE KGFEEGKTEG LETGLSEGQE QGHAKGLEQG LDEGRQQMAT
QAEVWQMLAD KLHDPLSQAN DETRDQLVKL AVTLAKSVIK VEVSTNQQVI LQALSEGIKA
LPINQTEYQI HMHPDDIALV NAHFGDEEMS KKGWNLVEAP AMERGGCDIT TVHNAVDVSI
ERRCRDVIEK FLLNQGLSDD