Gene MADE_02879 details

Gene Information

• Locus tag: MADE_02879
• Symbol: fliN
• ID: 6775524
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alteromonas macleodii 'Deep ecotype'
• Kingdom: Bacteria
• Replicon accession: NC_011138
• Strand: -
• Start bp: 3130310
• End bp: 3130717
• Gene Length: 408 bp
• Protein Length: 135 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 642756328
• Product: flagellar motor switch protein
• Protein accession: YP_002127169
• Protein GI: 196157680
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1886] Flagellar motor switch/type III secretory pathway protein
• TIGRFAM ID: [TIGR02480] flagellar motor switch protein FliN

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGAAG ATGGTATGGA CGATTGGGCT GCGGCCATGG CCGAGCAAGC CGAATCTGAA 
GCTGATCAAG AAGCCGGTGA CAACGAAGAT GTTCAGGTTG CCGAACTTGA CGAGTTAACC 
GACGATGCGC CGATCACCCA AGAAGAAAAG AAAAAGCTTG ATACGATCCT AGATATTCCC 
GTGACTATTT CAATGGAAGT AGGTCGTAGT CAAATAAGTA TCCGAAATCT GCTACAGTTG 
AACCAAGGGT CTGTGGTGGA GCTGGATCGT GTTGCCGGTG AGCCATTAGA TGTATTAGTA 
AATGGCACGT TGATTGCTCA TGGTGAAGTA GTAGTGGTCA ACGACAAATT CGGTATTCGA 
TTAACGGATG TTATTAGTCA AATTGAGAGA ATCAAGAAGC TCAGATAA 

 

Protein sequence

MSEDGMDDWA AAMAEQAESE ADQEAGDNED VQVAELDELT DDAPITQEEK KKLDTILDIP 
VTISMEVGRS QISIRNLLQL NQGSVVELDR VAGEPLDVLV NGTLIAHGEV VVVNDKFGIR 
LTDVISQIER IKKLR