| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02875 |
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| Symbol | fliR |
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| ID | 6775179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3128011 |
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| End bp | 3128790 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642756324 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_002127165 |
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| Protein GI | 196157676 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAGTCG AACTCGCCAC TATCAATCAG TTTCTTGCCG ACATGCTCTT ACCTTTTATG
CGTATAAGCG GGCTGTTTGT AGCTATGATT GGCTTAAGTG CAAAGTCTAT CCCTCCGCAG
GTTAGGGCGC TTTTAGGAAT AATGCTAACC CTTGTCATTA TGCCGGTTGT ACCTCCTTCA
CCTATTGAAA ACTTAGTGAG TGTCGGTACC TTTTTAATTG TTATTCAACA ATTACTGATA
GGCATCGCTA TTGGTTTTAT TTCGATGATG GTATTGAACA CCTTCGTGTT AGCAGGGCAG
ATCATCGCCA TGCAAACCGG TTTGGGCTTT GCTTCGATTG TCGACCCGGT TAATGGTATT
AACGTGCCGG CGGTCGGGCA GTTTTACCTT ATTTTAGCGA CCTTGTTGTT TTGGACACTC
GACGGCCACT TGTCGATGAT TCAAATGATA GTGATGAGTT TTGAGGCTTT TCCAATCGGC
GAGGCGTGGT GGACAGGCGA ACAGTTTCGC GATATTGCCC ATTGGGGAGG CTGGATGTTC
GTTTCCGCTA TTACGCTTTC ATTGGCGCCT ATCGTCTCGC TGTTAATTGT TAATTTGGCC
TTTGGTGTAA TGACAAAAGC TGCGCCACAG CTGAACATTT TCAGCATTGG TTTTTCCATT
GCTCAGCTAA TGGGGCTGCT GATTATTTGG ATAACGCTAG ATAACTTTAC TGCGCACTTT
GAAACCCAAT GGTTTAGGGC TGAACAGTTT ATGTGTGAAT TATTGAATAT TTGTCCTTAG
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| Protein sequence | MEVELATINQ FLADMLLPFM RISGLFVAMI GLSAKSIPPQ VRALLGIMLT LVIMPVVPPS
PIENLVSVGT FLIVIQQLLI GIAIGFISMM VLNTFVLAGQ IIAMQTGLGF ASIVDPVNGI
NVPAVGQFYL ILATLLFWTL DGHLSMIQMI VMSFEAFPIG EAWWTGEQFR DIAHWGGWMF
VSAITLSLAP IVSLLIVNLA FGVMTKAAPQ LNIFSIGFSI AQLMGLLIIW ITLDNFTAHF
ETQWFRAEQF MCELLNICP
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