Gene MADE_02872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02872 
Symbol 
ID6777204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3123046 
End bp3124479 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content44% 
IMG OID642756321 
Productflagellar biosynthesis protein 
Protein accessionYP_002127162 
Protein GI196157673 
COG category[N] Cell motility 
COG ID[COG1419] Flagellar GTP-binding protein 
TIGRFAM ID[TIGR03499] flagellar biosynthetic protein FlhF 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA GACGTTTCTT CGGCAAAGAT ATGCGTGAGG CGTTAAGCCA AGTTAAAGCT 
GAGTTAGGCA GTGATGCAGT GATCATGTCG AACCGCAAAG TTGCCGATGG CATTGAGCTT
GTTGCCGCCT ATGATAAAGA GCCTGAAGCA AAACTCTTCA CTCCAAAAAC ATCGCCTAAA
GCAACCCCTA AAGCATCAGG TCAAAAAGCC GTGCCTAGCT TAAGTGAGAT TATCGGTGAT
GATGGCCCCG ACAGTTTAAA AGCTCTGTTA GAAAAGCAGC ACGGCGGTAG TGCGCCTTCA
TCAAGTAATG CTTCAGCATC GCAGTCGCAT TCAGCCAACC ATAATCAGCC TATGTCTGCA
AATGCGAGAC ATGCCAACGA AATTGCGTCA CACCTTGATT TCTCAGAAGC CTTTATTGAT
GACGTAGAAA GCCAGCACCT TGCACAAGAC GAAGGCAGAG CAACAACATT TCCCGACCAC
CAAGCGTCCA GCATAGACGA GGCACCCGTC TCTCAATCTG CAGAATTGGC GCAAATTAAA
GAAGAGTTAG CGTCGTTGCG CGATGTTTTA CAATATCAGG TTGCAGACTT GATGGAAGCG
AAAAACAAGC GTCAAAAACC GGTACATCAA TACTTGATTA CCCGTCTAAC GGATATGGGG
TTAAGCAGTG CACTTGCCAG TCAGCTAATT AACTATACAC CAGCACACTA CAATGAACGA
GACGCATGGG TGTATCTTCT TAACCTATTG GCTAATCGCA TAAATGTGAC AGGAAACGAT
ATACTTAGTG CGCAAGGTGC AGTTGCCTTA GTCGGACCGA CGGGCACAGG TAAAACAACG
ACGGTTGCAA AACTAGCTGC TCGCTATGCA CAAAAGTACG GTGCAGATTC AGTAGCAATG
ATTACCATAG ATACGTATAG AATTGCGGCC TATGAGCAGC TCGCGACATA CGGAAAAATT
ATTGGCTGTA CGGTGAGAAA AGCGCAGACT AGTGAAGAAC TTGCGGATTT ATTATTCCAA
CTTCGTCATA AGCGTCTAGT ATTGATTGAT ACGGCAGGGT TTAGCCAACG GGATAGCCGT
TTAATTAAAC AGATTAAGCA GTTTGATAAT GGTCAAATGC CAAAAGTTAA AAAATATTTG
GTAGCGCAGG CAAATACACA ATATCCTGCC CTACAGCGCA TCATTAAGGC TTATGATGAT
ATCGAACTAA GTGGCTGTAT TTTCACAAAG TTAGATGAAT GCTACTCTTT AGGAGAGGTA
TTGAGCGCTG CAGTTGAATA TCAACTGCCG GTTAGTTATG TCACCGACGG TCAGAAAGTA
CCTGAAGACA TTAAGATTGC GGAGGCAAAA TCTTTAGTTT CTGCCGCTGC AAAGCTTTAT
AAAAAGTACG GTTTGAATCA TACTAGTAGC AACAACGCAA TTAAAACAGC ATAA
 
Protein sequence
MKIRRFFGKD MREALSQVKA ELGSDAVIMS NRKVADGIEL VAAYDKEPEA KLFTPKTSPK 
ATPKASGQKA VPSLSEIIGD DGPDSLKALL EKQHGGSAPS SSNASASQSH SANHNQPMSA
NARHANEIAS HLDFSEAFID DVESQHLAQD EGRATTFPDH QASSIDEAPV SQSAELAQIK
EELASLRDVL QYQVADLMEA KNKRQKPVHQ YLITRLTDMG LSSALASQLI NYTPAHYNER
DAWVYLLNLL ANRINVTGND ILSAQGAVAL VGPTGTGKTT TVAKLAARYA QKYGADSVAM
ITIDTYRIAA YEQLATYGKI IGCTVRKAQT SEELADLLFQ LRHKRLVLID TAGFSQRDSR
LIKQIKQFDN GQMPKVKKYL VAQANTQYPA LQRIIKAYDD IELSGCIFTK LDECYSLGEV
LSAAVEYQLP VSYVTDGQKV PEDIKIAEAK SLVSAAAKLY KKYGLNHTSS NNAIKTA