| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02859 |
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| Symbol | |
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| ID | 6777432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3109380 |
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| End bp | 3112004 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642756308 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_002127149 |
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| Protein GI | 196157660 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAG AATTTTCCAC ATTTATTAAT ATCGGTGAGC GCACCAACGT TACAGGTTCC
GCTCGCTTTA AACGCCTTAT TCTTGAAGGT GATTATGAAA CCGCGCTTGA TGTCGCTAGA
CAGCAGGTAG AAAACGGTGC CCAAATCATC GATATCAATA TGGATGAGGC CATGCTTGAT
TCCAAGCAGG CTATGATCAC CTTCTTAAAC CTCATAGCTT CTGAGCCCGA TATTAGCCGC
GTACCCATCA TGATTGATTC ATCAAAATGG GAAGTGATAG AGGCGGGCCT TAAATGCGTA
CAGGGCAAAG CTATTGTTAA CTCAATTAGC TTAAAAGAAG GGGAAGCGCT TTTTTTACAT
CAAGCTAAGC TCATTAAACG TTATGGTGCT GCAACCGTGG TTATGGCGTT CGACGAAACC
GGTCAGGCCG ACACCCAGGC CCGTAAAGTC GAGATTTGTC AGCGCAGCTA TAAACTGCTG
ACTGAAGACA TCGGTTTTCC GCCAGAAGAT ATTATTTTTG ACCCCAACAT TTTTGCTGTA
GCTACAGGTA TCGAGGAACA TGATAACTAC GCGGTGGACT TTATTGAAGC TACCCGCGAA
ATACGTAAAA CCTGTCCGTA CTCACATATC TCCGGCGGCC TATCTAATAT CTCTTTCTCG
TTCAGGGGTA ATAACCCAGT ACGAGAGGCC ATGCATTCGG TATTTCTATA TCACGCAATT
CGTGCAGGTA TGGATATGGC TATAGTTAAT GCAGGCCAGT TAGAGGTATA TGACGAAATT
CCACCTGAAC TTCGCGAAGC CGTTGAAGAC GTGATTTTAA ATCGCAGAAG TGATGCCACC
GAGCGTTTGC TAGACATTGC ACCTAACTAT CAAGGCGACG GTAAGGCCGC AGTAAAAGAA
GATTTAAGCT GGCGCGAACA AGACGTAAAT AAGCGTTTAG AGCACGCCCT TGTAAAAGGG
ATCACCGACT ATATCATCGA CGACACCGAA GAGGCCCGAC AACAGGCTGA ACGTCCGCTA
CACGTTATTG AAGGGCCTTT AATGGACGGC ATGAACGTAG TAGGTGATTT GTTCGGCGAA
GGTAAGATGT TCTTACCTCA GGTCGTAAAG TCTGCCCGCG TAATGAAAAA AGCGGTAGCG
CACTTACAGC CCTTCATCGA AGAAGAAAAA TCAGACGATG CTAAGAGCAA CGGTAAAATT
CTACTAGCAA CGGTAAAAGG CGACGTTCAC GATATCGGTA AAAACATTGT AGGTGTGGTA
CTACAGTGTA ATAACTTTGA AGTTATCGAT TTAGGCGTGA TGGTACCAGC CGCCACTATT
TTGCAAACCG CCAAAGACGA AAACGTAGAC ATGATTGGCC TGTCGGGGCT GATTACCCCA
TCGCTTGACG AAATGGTGCA TGTTGCGAAA GAAATGGAGC GTCAGGGTTT TGAAATTCCG
CTGCTTATTG GTGGGGCAAC CACGTCTAAA GCGCATACTG CCGTTAAAAT TGAGCAAAAT
TACCACGCCC CTGTTTCCTA CGTACCTAAT GCCAGTCGAG CGGTGGGTGT TTGTCAGCGC
TTACTTAATA AAGCGTCCCG TGACATCTAC GCCAAAGAGT TAGCGAAAGA GTACGAAACA
GTGCGCGAGC AGCATGCCCG TAAGAAGCCT CGCAGTAAGC CTGTCACGTT AGCGCAGGCT
AGAGATAACG CGTTTAAGCC CGACTTTAAC ACGCTGCCTG TAAAACCTGC GACATTAGGT
GTAACCCCTG TTACCGCTGA TTTAGCGACA CTGCGCAATT ATATTGACTG GACACCGTTC
TTTTTGACCT GGTCTTTAGC GGGTAAGTAT CCTCGAATAC TTAACGATGA TGTAGTCGGT
GAGCAGGCGC AGTCGTTGTT TAATGATGCC AACGCCATGC TAGATAAGAT CATTGAAGAC
AATACGCTTC AAGCGAAAGG TGTTATAGGG CTATTCCCCG CCAATCGCGT GGGCGATGAT
GTAGAAATTT ATAGCGATGA ATCGCGCACA AAAGTAAGCG GAGTAGGCCA CCACCTTCGT
CAACAAACGT TTAAAGACAA GTTCGCTAAC TATTGCTTAG CCGACTTTGT GGCTGAAAAG
TCGAGCGATA TTGAAGACTA TGTAGGCGCT TTTGCGGTCA CGGGGGGCAT AGGTGAAGAT
GAGCTGGCTG ATAGTTATAT TCAAGCGGGT GACGACTACA ATGGCATTAT GGTAAAAGCC
GTAGCCGACA GGTTAGCCGA AGCTTTTGCT GAATATCTTC ATGAGCAGGT ACGTAAACAT
TACTGGGGTT ATGCAAAGGA CGAAGCGCTA AGTAACGAAG CGCTCATTCG CGAAAAATAT
CAAGGTATTC GCCCGGCTCC AGGTTATGCA GCCTGCCCAG AACATACTGA AAAGCAGCTT
ATTTGGGATT TGTTGTCTGT TGAAGCGCAT ACGGGGATGA AGCTCACCGA AAGCTATGCG
ATGTGGCCCG GGGCGTCAGT TTCTGGTTGG TATTTCGCGC ATCCTGACGC TAAGTATTTC
GCGGTTGCTA AAATTCAAGG CGACCAAGTA GAAGACTACG CTAAGCGCAA AGGTTGGACG
CTAGAAGAGG CCGAGAAGTG GCTTGGTCCT AACTTAAGTG ACTAG
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| Protein sequence | MSAEFSTFIN IGERTNVTGS ARFKRLILEG DYETALDVAR QQVENGAQII DINMDEAMLD
SKQAMITFLN LIASEPDISR VPIMIDSSKW EVIEAGLKCV QGKAIVNSIS LKEGEALFLH
QAKLIKRYGA ATVVMAFDET GQADTQARKV EICQRSYKLL TEDIGFPPED IIFDPNIFAV
ATGIEEHDNY AVDFIEATRE IRKTCPYSHI SGGLSNISFS FRGNNPVREA MHSVFLYHAI
RAGMDMAIVN AGQLEVYDEI PPELREAVED VILNRRSDAT ERLLDIAPNY QGDGKAAVKE
DLSWREQDVN KRLEHALVKG ITDYIIDDTE EARQQAERPL HVIEGPLMDG MNVVGDLFGE
GKMFLPQVVK SARVMKKAVA HLQPFIEEEK SDDAKSNGKI LLATVKGDVH DIGKNIVGVV
LQCNNFEVID LGVMVPAATI LQTAKDENVD MIGLSGLITP SLDEMVHVAK EMERQGFEIP
LLIGGATTSK AHTAVKIEQN YHAPVSYVPN ASRAVGVCQR LLNKASRDIY AKELAKEYET
VREQHARKKP RSKPVTLAQA RDNAFKPDFN TLPVKPATLG VTPVTADLAT LRNYIDWTPF
FLTWSLAGKY PRILNDDVVG EQAQSLFNDA NAMLDKIIED NTLQAKGVIG LFPANRVGDD
VEIYSDESRT KVSGVGHHLR QQTFKDKFAN YCLADFVAEK SSDIEDYVGA FAVTGGIGED
ELADSYIQAG DDYNGIMVKA VADRLAEAFA EYLHEQVRKH YWGYAKDEAL SNEALIREKY
QGIRPAPGYA ACPEHTEKQL IWDLLSVEAH TGMKLTESYA MWPGASVSGW YFAHPDAKYF
AVAKIQGDQV EDYAKRKGWT LEEAEKWLGP NLSD
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