| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02836 |
|---|
| Symbol | |
|---|
| ID | 6776489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 3085352 |
|---|
| End bp | 3086347 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642756283 |
|---|
| Product | peptide transport protein (ABC superfamily, membrane) |
|---|
| Protein accession | YP_002127126 |
|---|
| Protein GI | 196157637 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG4168] ABC-type antimicrobial peptide transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.996843 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAACCC TTTTGGTGTT AGCGATTATC TCTTTTTCGC TCGCTTACCT TTTTCCCGGT
GACACACTGG AAAACTTAAC AGGCTTAGTG CCAGAAAACG ACATTCAGCG TGCAGCCTTA
GAGCGGCAGT TCAAGCTAGA CCAGTCTTAT ATTTTTCAGT TCTTTTATTA TGTAGGCAAC
CTACTCACCG GTGACTGGGG CTATAGCTTT ACGTCCGGGC TGCCGCTAAG AGAAGAGGTA
GGCATCGCGA TGCCAGCCAC GATAGAGCTA GCAACCTACG CTATGCTAAT GGCCCTATTC
GTTGGTGTTC CGCTGGGCTA TTACGCTGGA ATTCGATGCT ATTCAACGTC AGACCACCTT
ATTAATAGCG TGAGCATTAC TACGTATTCC TTTCCTGTTT TTTGGTTTGC CCTTTTACTC
ATTCTTATTT TCAGTTTGCA GTTAGACGCG GCGCCGATGT CTGGACGTAT CAGCCTGCTA
TATGACATTG AGCCTGTAAC TGGTTTTATC CTTATCGATA TTTTACTATC TGATATTGAA
AACAAGTCTC TGGCGTTTAA AGACGCACTG TCGCACATTG CATTGCCTAC CTTCTCAATC
GGCGCTATCG CTACCGCATC GATGATAAGA GTAACTCGAC GCTCAGTTAT TGATGTAAAG
CACCGACCTT ACATTGCAGC CGCTTTGTCC CGCGGCCTAT CAAGCTGGCA AATATTTTTC
CGACATATAT TGCGCAACGC CCTGCTTCCC ATATTGCCCC TAATGGCTAT TCAAATTACC
ACGCTTATTA CTAATGCGAT GATCGTTGAA ACCTTATTTT CATGGCCAGG CATAGGAAAT
TGGCTTATTC AAGCCATTTA CCAACGGGAT TATCCCGCCT TACGAATTGG AATGATGGCG
GTATCTTTTG TTGTTATAAC TTTAACAATC CTCATCGATT TGTTTAACCG CATGATTGAC
CCAAGCAGAG AGAAATACGA ACGTGCCACA GTTTAG
|
|---|
| Protein sequence | MLTLLVLAII SFSLAYLFPG DTLENLTGLV PENDIQRAAL ERQFKLDQSY IFQFFYYVGN
LLTGDWGYSF TSGLPLREEV GIAMPATIEL ATYAMLMALF VGVPLGYYAG IRCYSTSDHL
INSVSITTYS FPVFWFALLL ILIFSLQLDA APMSGRISLL YDIEPVTGFI LIDILLSDIE
NKSLAFKDAL SHIALPTFSI GAIATASMIR VTRRSVIDVK HRPYIAAALS RGLSSWQIFF
RHILRNALLP ILPLMAIQIT TLITNAMIVE TLFSWPGIGN WLIQAIYQRD YPALRIGMMA
VSFVVITLTI LIDLFNRMID PSREKYERAT V
|
|---|
| |