Gene MADE_02835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02835 
Symbol 
ID6777767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3083583 
End bp3085319 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content46% 
IMG OID642756282 
Productputative ABC transporter, periplasmic peptide-binding protein 
Protein accessionYP_002127125 
Protein GI196157636 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCATA GTTTGGTAAA GCGTTTGTCA TTATGTTTAT GTACAGCGCT TCTTGTTGCA 
TCCTGTGCAA AACAGAATAA ACAAGCGTTT TACAATACGG GTATTATTTA CTGCTCTGAA
AGCAATCCAG TGACGTTTAA CCCCCAACTT GATACGTCAA GCACAACGTC AGATGCTTCC
TCTCACCAAC TTTACGACAG GCTTCTCGAT TTCGATCCTG AATCTGGCCG CATTGTGCCA
AGCTTAGCCA GTAGCTGGCT TGTAAGTAAT GACGGCTTAA CCTATGCCTT TCAGCTTCGA
AAAGACGTGT CGTTTCACTC TACTCGTTAT TTTGAGCCGA CAAGAAACTT TAACGCCGAC
GATGTAATAT TTAGCATCGA CAGGTGGCGA CTAAACTCAC ACCCTTATCA CTATGTGTCC
GGCGGTCGCT ACCCCTACTT TGAAAGTATT GGCCTTGCTC AAAACATTGA ATCTGTCGAA
CGGATCAACG GCTACCGTGT AGAGATAACA CTCAAACATC GCGATAGCTC GTTTTTAGCA
AATTTAGCGA CAGATTTCGC GGTAATATTG TCAGAGGAAT ACGCTACTCA GTTGGCCAAC
GCCGGCACAC CGAGCAAAAT AGATGAGCTT CCCATCGGGA CCGGACCGTT TAAATTTGAT
AGCTATCGCA AAGACCATTT CATAAAGTAC CTTAAGCACG AAAACTATTG GCGCACCGAG
TTATTGACCG AAAATGCAAA CATTACCCGC GATATTGAAA ATATTGAAAC CAACGCAAAA
AGTGAAAATA GCAGCGAAGC GATAGCAGAT GGTCTTTCTA AAAAGACAGA CGGACACGTA
GTTGAACAGC TTATTTTTGA TATTACGCCA CGCAGCTCAC TACGACTGGC TAAGTTAATG
ACTGGCGAGT GCGACGCCAC TGCCTTTCCC GCTCAAACAG AGCTTGAGGT AATAAGGGCT
AGAGACGATC TTACGCTCGC TGAAAAGCCA GGGCTGAATG TTGGCTTCTG GGCTTTTAAT
ACTCAGCGTC CGCCTTTTGA TAACCCCGAT GTAAGACGCG CTTTAGCCGT GGCCATTGAT
AAAAACACGC TGTTAGAAGC CGTTTACTTT GACAGCGCAA CGCGAGCTAA GACCCTTCTT
CCTGCAGCGA GTTGGGCATT TCAAAACGAT GCTGATGATA CGGCCTATAA CCCAGTTTTA
GCGCGAAAGT TACTGGCAGA TGCAGGTATA AAACCTGGCT TTTCAATGAC AATATGGGCC
ATGCCTGTAG AGCGCTCTTA TAACCCCAAT GCCACTAAAA TGGCCGAACT TATTCAGCGT
TATTTAAATG ATGTAGGCGT TGAAGCAACC ATTGTTAGCT ACGACTGGAC AACCTTTAGA
CGGCATTTAC AAGAAGGTTT ACACGATTCT GTGCTTATCG GCTGGTCAGC AGATAATGGC
GACCCGGATA ACTTTTATCG CCCGCTGCTA AGCTGTGGCG CTATCCCTTC TGGCACAAAC
CGCGCCATGT GGTGTAACGA AGATTATGAT AGATTACTTA ACAGCGCCCT TCAAACTGAT
GATATTGAAG CCCGCACAGC TATTTACCGG CAGGTAAACC GATTACTGTA TGAACGCCTT
CCGTTAGTTC CAATAGCCCA TGCCTATCGC TACCAGGCAT ACCGAGATGA GTTGGAAGGA
ATGACAATTA ATCCCTATGG CGGCGTACGC TTTGGTGGAG TAGAAAAAAC ACTGTGA
 
Protein sequence
MSHSLVKRLS LCLCTALLVA SCAKQNKQAF YNTGIIYCSE SNPVTFNPQL DTSSTTSDAS 
SHQLYDRLLD FDPESGRIVP SLASSWLVSN DGLTYAFQLR KDVSFHSTRY FEPTRNFNAD
DVIFSIDRWR LNSHPYHYVS GGRYPYFESI GLAQNIESVE RINGYRVEIT LKHRDSSFLA
NLATDFAVIL SEEYATQLAN AGTPSKIDEL PIGTGPFKFD SYRKDHFIKY LKHENYWRTE
LLTENANITR DIENIETNAK SENSSEAIAD GLSKKTDGHV VEQLIFDITP RSSLRLAKLM
TGECDATAFP AQTELEVIRA RDDLTLAEKP GLNVGFWAFN TQRPPFDNPD VRRALAVAID
KNTLLEAVYF DSATRAKTLL PAASWAFQND ADDTAYNPVL ARKLLADAGI KPGFSMTIWA
MPVERSYNPN ATKMAELIQR YLNDVGVEAT IVSYDWTTFR RHLQEGLHDS VLIGWSADNG
DPDNFYRPLL SCGAIPSGTN RAMWCNEDYD RLLNSALQTD DIEARTAIYR QVNRLLYERL
PLVPIAHAYR YQAYRDELEG MTINPYGGVR FGGVEKTL