Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02835 |
Symbol | |
ID | 6777767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3083583 |
End bp | 3085319 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642756282 |
Product | putative ABC transporter, periplasmic peptide-binding protein |
Protein accession | YP_002127125 |
Protein GI | 196157636 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCATA GTTTGGTAAA GCGTTTGTCA TTATGTTTAT GTACAGCGCT TCTTGTTGCA TCCTGTGCAA AACAGAATAA ACAAGCGTTT TACAATACGG GTATTATTTA CTGCTCTGAA AGCAATCCAG TGACGTTTAA CCCCCAACTT GATACGTCAA GCACAACGTC AGATGCTTCC TCTCACCAAC TTTACGACAG GCTTCTCGAT TTCGATCCTG AATCTGGCCG CATTGTGCCA AGCTTAGCCA GTAGCTGGCT TGTAAGTAAT GACGGCTTAA CCTATGCCTT TCAGCTTCGA AAAGACGTGT CGTTTCACTC TACTCGTTAT TTTGAGCCGA CAAGAAACTT TAACGCCGAC GATGTAATAT TTAGCATCGA CAGGTGGCGA CTAAACTCAC ACCCTTATCA CTATGTGTCC GGCGGTCGCT ACCCCTACTT TGAAAGTATT GGCCTTGCTC AAAACATTGA ATCTGTCGAA CGGATCAACG GCTACCGTGT AGAGATAACA CTCAAACATC GCGATAGCTC GTTTTTAGCA AATTTAGCGA CAGATTTCGC GGTAATATTG TCAGAGGAAT ACGCTACTCA GTTGGCCAAC GCCGGCACAC CGAGCAAAAT AGATGAGCTT CCCATCGGGA CCGGACCGTT TAAATTTGAT AGCTATCGCA AAGACCATTT CATAAAGTAC CTTAAGCACG AAAACTATTG GCGCACCGAG TTATTGACCG AAAATGCAAA CATTACCCGC GATATTGAAA ATATTGAAAC CAACGCAAAA AGTGAAAATA GCAGCGAAGC GATAGCAGAT GGTCTTTCTA AAAAGACAGA CGGACACGTA GTTGAACAGC TTATTTTTGA TATTACGCCA CGCAGCTCAC TACGACTGGC TAAGTTAATG ACTGGCGAGT GCGACGCCAC TGCCTTTCCC GCTCAAACAG AGCTTGAGGT AATAAGGGCT AGAGACGATC TTACGCTCGC TGAAAAGCCA GGGCTGAATG TTGGCTTCTG GGCTTTTAAT ACTCAGCGTC CGCCTTTTGA TAACCCCGAT GTAAGACGCG CTTTAGCCGT GGCCATTGAT AAAAACACGC TGTTAGAAGC CGTTTACTTT GACAGCGCAA CGCGAGCTAA GACCCTTCTT CCTGCAGCGA GTTGGGCATT TCAAAACGAT GCTGATGATA CGGCCTATAA CCCAGTTTTA GCGCGAAAGT TACTGGCAGA TGCAGGTATA AAACCTGGCT TTTCAATGAC AATATGGGCC ATGCCTGTAG AGCGCTCTTA TAACCCCAAT GCCACTAAAA TGGCCGAACT TATTCAGCGT TATTTAAATG ATGTAGGCGT TGAAGCAACC ATTGTTAGCT ACGACTGGAC AACCTTTAGA CGGCATTTAC AAGAAGGTTT ACACGATTCT GTGCTTATCG GCTGGTCAGC AGATAATGGC GACCCGGATA ACTTTTATCG CCCGCTGCTA AGCTGTGGCG CTATCCCTTC TGGCACAAAC CGCGCCATGT GGTGTAACGA AGATTATGAT AGATTACTTA ACAGCGCCCT TCAAACTGAT GATATTGAAG CCCGCACAGC TATTTACCGG CAGGTAAACC GATTACTGTA TGAACGCCTT CCGTTAGTTC CAATAGCCCA TGCCTATCGC TACCAGGCAT ACCGAGATGA GTTGGAAGGA ATGACAATTA ATCCCTATGG CGGCGTACGC TTTGGTGGAG TAGAAAAAAC ACTGTGA
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Protein sequence | MSHSLVKRLS LCLCTALLVA SCAKQNKQAF YNTGIIYCSE SNPVTFNPQL DTSSTTSDAS SHQLYDRLLD FDPESGRIVP SLASSWLVSN DGLTYAFQLR KDVSFHSTRY FEPTRNFNAD DVIFSIDRWR LNSHPYHYVS GGRYPYFESI GLAQNIESVE RINGYRVEIT LKHRDSSFLA NLATDFAVIL SEEYATQLAN AGTPSKIDEL PIGTGPFKFD SYRKDHFIKY LKHENYWRTE LLTENANITR DIENIETNAK SENSSEAIAD GLSKKTDGHV VEQLIFDITP RSSLRLAKLM TGECDATAFP AQTELEVIRA RDDLTLAEKP GLNVGFWAFN TQRPPFDNPD VRRALAVAID KNTLLEAVYF DSATRAKTLL PAASWAFQND ADDTAYNPVL ARKLLADAGI KPGFSMTIWA MPVERSYNPN ATKMAELIQR YLNDVGVEAT IVSYDWTTFR RHLQEGLHDS VLIGWSADNG DPDNFYRPLL SCGAIPSGTN RAMWCNEDYD RLLNSALQTD DIEARTAIYR QVNRLLYERL PLVPIAHAYR YQAYRDELEG MTINPYGGVR FGGVEKTL
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