Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02822 |
Symbol | |
ID | 6776077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3072003 |
End bp | 3073091 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 642756269 |
Product | tryptophan 2,3-dioxygenase |
Protein accession | YP_002127112 |
Protein GI | 196157623 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3483] Tryptophan 2,3-dioxygenase (vermilion) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.111866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAGA ACATAGAGCC CTGCTATTAC GGCGATTATC TGCAATTAGA TAAAATATTA GGGGCCCAAG ACTTACAAAG TGAAAAATAC GGTGATGGGG CTCACGAAGA AATGCTCTTT ATCATAGTGC ATCAGGTTTA CGAGTTGTGG TTTAAACAAG TCCTTCACGA ACTTAACGCG GTAATTGATA CATTCAATCA AGAGGCGGTA AAAGATCAGC AACTCACGCA GGTGGTACAC AGACTGCAGC GCATAATTCA AATTCAAAAG TTAATGAATG ACCAGATTGC CATTATGGAG ACCATGACGC CTCAGCAATT TCTTTCATTC AGGGACTATC TGGTTCCCGC TTCAGGTTTC CAAAGTATTC AGTTTAAACG GTTAGAAATA TCCCTTGGCT TAAAGCGAGA GTTTCGCATT GATTTTGATA AGCAAAGTTT CTACAACCGT TTAACTGATA AAGACAGAGC CTTATTAGAA AACCTCGAAA ATAAACCTAG CTTGTTTGAA TTGGTTGATA AGTGGCTGTC TCGAATGCCA TTGCTAAAAA CAGAGGATTT TGATTTTTGG CAGTATTATA AAGATGCGGC TGACGAAATG TTGAAAGATG ATCATCACAC CGTCTCAACC AGCGACATGT TGTCTGATAC AGAAAAGCGA CAAGAGATAA AAGACTTGCA AGCGACCATG GAAAACTTCG ACGCGTTGTT TAACGAAACA CAGTTCGAAA AGCTAAGAGG CGAGGGCAAG TTTCGTTTAA GTCATAACGC CTTACTATCA GCACTGTTTA TAAAGCAGTA CTCAGAAGAA CCAATCTTTA ATCTACCTTT CCAACTTATT ACTGCGTTAA CCGAAATAGA CGAGCAGTTG ACAATCTGGC GTTATCGTCA CGCTATGATG GTTCAACGCA TGCTAGGGAC CAAAATAGGG ACAGGGGGCT CATCAGGCCA CCATTATCTT AAGAAGACCA CAGAATCCAA CCGTATTTAC TTAGACTTCT TTAATATGGC GACCTTTCTA TTACCAAAAA GTGCATTACC GGATTTACCA GAATCCGTTC GTCGACGGTT AGGGTTTTAT TTGCAATAG
|
Protein sequence | MKKNIEPCYY GDYLQLDKIL GAQDLQSEKY GDGAHEEMLF IIVHQVYELW FKQVLHELNA VIDTFNQEAV KDQQLTQVVH RLQRIIQIQK LMNDQIAIME TMTPQQFLSF RDYLVPASGF QSIQFKRLEI SLGLKREFRI DFDKQSFYNR LTDKDRALLE NLENKPSLFE LVDKWLSRMP LLKTEDFDFW QYYKDAADEM LKDDHHTVST SDMLSDTEKR QEIKDLQATM ENFDALFNET QFEKLRGEGK FRLSHNALLS ALFIKQYSEE PIFNLPFQLI TALTEIDEQL TIWRYRHAMM VQRMLGTKIG TGGSSGHHYL KKTTESNRIY LDFFNMATFL LPKSALPDLP ESVRRRLGFY LQ
|
| |