| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02816 |
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| Symbol | |
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| ID | 6775913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3062854 |
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| End bp | 3064668 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 642756263 |
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| Product | TPR domain protein |
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| Protein accession | YP_002127106 |
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| Protein GI | 196157617 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.36083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCTGC AACCACATAT AATAATTCCA AACCTTATTA ATGCCTTTAA CAAAGGTGAT
TTCCTCTTGG TCATCAACAC GGTGAAGCAA AATGCCGCCA TAGCACGTGC TGATGCAGTT
GTTCCGCAGT TGTACGGCAG TGCGATGAGG AAAATTGGTA GGCTTGATGA TGCCGCAAAA
ATTTTTGAAA AAGGTTTAAA GCTTTTTCCT CAATCTTCTG ACTTGATGAA TAGCTACGGA
AACCTGCTTC TCGATAAAGG GCAGACTCAC AAAGCTATCT TATGGTTTAC TAAAGCTTTA
AAAGTTAAGC CCGGCGCATT TGATTACAAG TACAATTTGG CAAGAGCCTT TCTAGTTTCC
AAGCGTTATA AAGATGCGGA AATGCAATGT CACGATTTGT TAAAAAGAGA GCCTATTAAA
AGCACAGTTC TACTGCTGAT CGCATCCATT TTAATTGAAA ATAAACGCGA TGCTGAGGCT
GAGCGCTATT TGAAAAAGTT GTTAGAAACC GAACCGAAAA ATGTTAAAGC GCTCAATAAT
TTAGGAAATA TTAAGCGAAG AAATAATCAG TTTAACGAAG CAATTTTGTT ATATAAAAAG
GCACTCTCGA CGGGTCAATC AACCGCTGAA TTGTTTCAAA ACCTGGCGGC AGCCTTTGCA
CTTAATGGTT TGTTGGACGA GGCTTTCGCC ACCTATAAAG AGGGGTTAAC TACGTTTCCT
GATAGTGTCG GTTTACACAA AGAATATGCA CATCTAGCGT GGGTACAAAA CGTCGAGGCG
CCGTTTGCTT TGTTAGAAAA AAACTTGTCA TTAGACAAGC CTGATTTAAT TCTTGCTTAT
ACCGAACTAA TGATAAGAGT AGAAGAGTTT GACAAAGCGA AAGTGTGGTT AGAAAAACTG
GTCGAAGCTA AGCTTCCATC TTATCAAATT GCAGCGGCGG CGAGCTTATC GAATACGTTA
AGAGAACTTG GAGATTTTGA TAGGGCGCTG GCTACGGTTA GCGTTAACGC CTCGAAACCG
ACAGTTGAAA CGCTCCCTTT ACTTATTGAG AAAAGTTACG CTCTATTAAG CCTCAAGCGA
TATAAAGAAG CAGTTAAGGC ACTTGAACTT GTTTGCCGCA TCGCGCCATT CAACCAAGGT
TATTGGACGC TTTTATCTAC AGCGTATAAG GCGTGCGGAA ATGAGCAAAA GTATAGCGAG
TTATGTAATT ACCAAAAGTT TGTTGAGGTC ACACCGCTTT TTGAAAGTGA AGGCAGTAAT
CTAAGCTTCA TAGAAGCATT GGAAGCGCAT CTTAATACGC TACATAATAA TGAACGGCAT
CCTATTGGCC AGTCTTTGCG CAATGGCTCT CAAACCTTCG AGAATCTATT AGAGGCCGAA
CACGATTTGA TCAAAGCGCT TAAAATTGCA ATAGAAGATA GGGCGACATC TTTTTTATCT
GCGCTGTTGT CTCAGAAAAA GCACCCGTTT TTATCTCGAC TACACCCAGA TGTTAACTTT
ATTGGTAGCT GGTCTGTAAG GCTACGTAAA AAAGGTTTTC ATAAATCACA TTATCACTCG
GAAGGTTGGC TTAGCGGTGT ATTGTATGTA GATGTGCCTA GTGAAGTAGA ACAAAACGGT
AATGGTTGGC TGGTTTTTGG CCGCCCCGAC ATTACCGGAG TGACCATGGT AGAAGACTTT
GCTATTAAAC CAAAGAAAGG CAACCTAGTA CTCTTTCCTT CATATATGTG GCATGGAACA
AACCCTATTT TAACGGACGA ACAACGACTA ACGGTAGCGT TTGATATCGT GCCTGCTAAT
GAGAGCCAAG GTTAA
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| Protein sequence | MQLQPHIIIP NLINAFNKGD FLLVINTVKQ NAAIARADAV VPQLYGSAMR KIGRLDDAAK
IFEKGLKLFP QSSDLMNSYG NLLLDKGQTH KAILWFTKAL KVKPGAFDYK YNLARAFLVS
KRYKDAEMQC HDLLKREPIK STVLLLIASI LIENKRDAEA ERYLKKLLET EPKNVKALNN
LGNIKRRNNQ FNEAILLYKK ALSTGQSTAE LFQNLAAAFA LNGLLDEAFA TYKEGLTTFP
DSVGLHKEYA HLAWVQNVEA PFALLEKNLS LDKPDLILAY TELMIRVEEF DKAKVWLEKL
VEAKLPSYQI AAAASLSNTL RELGDFDRAL ATVSVNASKP TVETLPLLIE KSYALLSLKR
YKEAVKALEL VCRIAPFNQG YWTLLSTAYK ACGNEQKYSE LCNYQKFVEV TPLFESEGSN
LSFIEALEAH LNTLHNNERH PIGQSLRNGS QTFENLLEAE HDLIKALKIA IEDRATSFLS
ALLSQKKHPF LSRLHPDVNF IGSWSVRLRK KGFHKSHYHS EGWLSGVLYV DVPSEVEQNG
NGWLVFGRPD ITGVTMVEDF AIKPKKGNLV LFPSYMWHGT NPILTDEQRL TVAFDIVPAN
ESQG
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