Gene MADE_02802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02802 
Symbol 
ID6775868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3049251 
End bp3049973 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content44% 
IMG OID642756249 
ProductCholine kinase involved in LPS biosynthesis 
Protein accessionYP_002127092 
Protein GI196157603 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0510] Predicted choline kinase involved in LPS biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.994431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGAAG GAGAGCAAAA CCAAGGCCGA GACCCAAAAC AATCGTGCTG TGTAGGTGAT 
TTTGCTGTTA AGTGGTTAGG TGACGATCGC TTTAGCGGTA TTGACCGCAC TTATCAGTTC
GCTTTGCAGA AAAAACTATG TCGCTTAGGT TTAGCACCAC AACCTATCTG GTTAAGCGAT
GATGAAACAA TTTGGGTAGA GCAATGGCAA AGCGACACAA CTAACCCTAG TCTAACCCCT
CAGTGTTTAG CTCAAACCCT TGCCAGCGTT CATCAGCTGT CGATAAAGGC CCACCCGCTA
AAACTTGCCG CAAGATGGCA GCACTATATT GATATCGCTA AGCTAAACAC GGATAGCACT
TTGTACCAAA AAGCTAGGCG ATTGCGGCCT AAGGTTTTGC AAAGCGAGCA GGCCGAAAAC
GATAGTGTGT TATGTCATAA CGACTTGGCA GTAAATCACA TATTGATTAG GCGAGATAAC
ACGCTCACTG TTATTGATTG GGAGTATGCT GCGATGGGAA ACCGTTATTT TGACTTAGCT
AGCTGTGCAC TTATCAATAA GCTAGATAGC ATGACAAGTA CCGAACTCGT AAAGCGCTAC
GCAGATATAA TGAGAATTAA TCAACAGATT GCACTCGCGG AGTTCAACCT TCATAAAGAG
ATAGTTTCGG TAACGAATGA CCTCTGGTTT GCGGCGCTAA AAGCCAACGA CGCATTGATT
TAA
 
Protein sequence
MVEGEQNQGR DPKQSCCVGD FAVKWLGDDR FSGIDRTYQF ALQKKLCRLG LAPQPIWLSD 
DETIWVEQWQ SDTTNPSLTP QCLAQTLASV HQLSIKAHPL KLAARWQHYI DIAKLNTDST
LYQKARRLRP KVLQSEQAEN DSVLCHNDLA VNHILIRRDN TLTVIDWEYA AMGNRYFDLA
SCALINKLDS MTSTELVKRY ADIMRINQQI ALAEFNLHKE IVSVTNDLWF AALKANDALI