Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02802 |
Symbol | |
ID | 6775868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3049251 |
End bp | 3049973 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642756249 |
Product | Choline kinase involved in LPS biosynthesis |
Protein accession | YP_002127092 |
Protein GI | 196157603 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.994431 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGAAG GAGAGCAAAA CCAAGGCCGA GACCCAAAAC AATCGTGCTG TGTAGGTGAT TTTGCTGTTA AGTGGTTAGG TGACGATCGC TTTAGCGGTA TTGACCGCAC TTATCAGTTC GCTTTGCAGA AAAAACTATG TCGCTTAGGT TTAGCACCAC AACCTATCTG GTTAAGCGAT GATGAAACAA TTTGGGTAGA GCAATGGCAA AGCGACACAA CTAACCCTAG TCTAACCCCT CAGTGTTTAG CTCAAACCCT TGCCAGCGTT CATCAGCTGT CGATAAAGGC CCACCCGCTA AAACTTGCCG CAAGATGGCA GCACTATATT GATATCGCTA AGCTAAACAC GGATAGCACT TTGTACCAAA AAGCTAGGCG ATTGCGGCCT AAGGTTTTGC AAAGCGAGCA GGCCGAAAAC GATAGTGTGT TATGTCATAA CGACTTGGCA GTAAATCACA TATTGATTAG GCGAGATAAC ACGCTCACTG TTATTGATTG GGAGTATGCT GCGATGGGAA ACCGTTATTT TGACTTAGCT AGCTGTGCAC TTATCAATAA GCTAGATAGC ATGACAAGTA CCGAACTCGT AAAGCGCTAC GCAGATATAA TGAGAATTAA TCAACAGATT GCACTCGCGG AGTTCAACCT TCATAAAGAG ATAGTTTCGG TAACGAATGA CCTCTGGTTT GCGGCGCTAA AAGCCAACGA CGCATTGATT TAA
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Protein sequence | MVEGEQNQGR DPKQSCCVGD FAVKWLGDDR FSGIDRTYQF ALQKKLCRLG LAPQPIWLSD DETIWVEQWQ SDTTNPSLTP QCLAQTLASV HQLSIKAHPL KLAARWQHYI DIAKLNTDST LYQKARRLRP KVLQSEQAEN DSVLCHNDLA VNHILIRRDN TLTVIDWEYA AMGNRYFDLA SCALINKLDS MTSTELVKRY ADIMRINQQI ALAEFNLHKE IVSVTNDLWF AALKANDALI
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