Gene MADE_02797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02797 
Symbol 
ID6775305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3045810 
End bp3046757 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content47% 
IMG OID642756243 
Producthypothetical protein 
Protein accessionYP_002127087 
Protein GI196157598 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.605573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATTTTT TAAAACGCAT GTCTTCATTA TCGGTGACGG AAAAAGCGCA ATCTAAAGGT 
ATAAAAATGC TTTTAGTTGC AGTGTTGTGT TTAGGGCTTA ATTGGCCGGG CATGAAATTG
GGCCTAGAGA TTGTTGGCCC GGTGTGGATG GTTTGCCTAC GTTTTCTACT CAGTCTTCCA
GTACTCGCGC TTTTTGTGCT TATCACTAAG AAACGTTTGC CGGTATTGAA TCGTAAAGAC
CGGTCAGTGG TTTTTGTGGT CGCGTTTTTC CAGTTTATCT TGTCGATGGG CCTTATTACG
GTGTCGCTGC AATATATCCC AGCTGGAACC GCTAGTATTC TCATTTATAC AACGCCGCTT
TGGATGCTAC TAATTGATAC GTTATGGTAT CGACAACGCC CGCCCTCAAA GCGATTAATT
CTTACCGGAA TTTCTACTAT TGGCTGTGCG ATGATTTTAT TTGCCTCGGG GCAACCGGGC
GCATGGCTGC CGCTCTTTGG TATGTTGCTG GCTTCTGCAT TGTGGGCAGT CGCTATTCGA
AGGGTGTCTT TCCACAAGTG GAAAGGAAGC GTCATTGAAG CGGTGTTCTG GCAGTTTACT
ATTGCAGGTT TCGCCATGCT TGCTATTGCT CTTATGGTAG AGCCAACGCC GAATTTTGGC
GCTTACGATA TAAGCGACTG GTTGTTGCTA GCGTACATAG GGCCGGTGGC AACAGGGCTT
GGTTTCGGCC TTATGGTAGC GGCGGGGCCA AAATTGCCGC CAGATAAAAT CGTTTTAATC
AGTACGCTTA CGCCAATCGT TGGGTATGTA AGCTCAGTGC TACTGCTTAA AGAAACCCTG
CTGCCTATGG TGGTGGCCGG CGCTATATTG ATGATTGCAG CGCTTATTGT GAATGGCCTT
CCTCAAAGTA CGCTTAAAAA AATGCTAGGC AAGGGGCAGG CTAAATAG
 
Protein sequence
MDFLKRMSSL SVTEKAQSKG IKMLLVAVLC LGLNWPGMKL GLEIVGPVWM VCLRFLLSLP 
VLALFVLITK KRLPVLNRKD RSVVFVVAFF QFILSMGLIT VSLQYIPAGT ASILIYTTPL
WMLLIDTLWY RQRPPSKRLI LTGISTIGCA MILFASGQPG AWLPLFGMLL ASALWAVAIR
RVSFHKWKGS VIEAVFWQFT IAGFAMLAIA LMVEPTPNFG AYDISDWLLL AYIGPVATGL
GFGLMVAAGP KLPPDKIVLI STLTPIVGYV SSVLLLKETL LPMVVAGAIL MIAALIVNGL
PQSTLKKMLG KGQAK