| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02773 |
|---|
| Symbol | |
|---|
| ID | 6776155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 3020706 |
|---|
| End bp | 3021869 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642756219 |
|---|
| Product | putative fatty acid desaturase |
|---|
| Protein accession | YP_002127063 |
|---|
| Protein GI | 196157574 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3239] Fatty acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.509606 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACTA ACGTTGCAAT AGACAATCAG CACCGTGAAG AAGCCATCAA GCATGCGAAC
TTGCCGATGC ACGAAACTCA GGAAACTCTA GCAACTCAGC CTACGAGCGC TAGAAAGAAA
CCGAACTACG AGATACTTGC CGCACAGCTT GATGAAATCA AAGCCGATAT TAAACAGAAA
GTGGGCGCTG AAGATGCTGC CTACATTCGA CGTATCATTT TTATTCAGCG TATTTGTGAA
TGGAGTGGCC GTATATTATT AATGCTGGGT TTCTTACAGC CTCTGCTTTG GGTTGCCGGC
GTATTAAGCC TAGCGACGGC TAAAATACTC GACAATATGG AAATTGGCCA TAACGTGATG
CACGGTCAGT ACGATTGGAT GAACGATAAA CATATCAATT CAAAAGGCTA TGAGTGGGAT
ATTGCCTGCG ATGGCGCAAG TTGGAATCGC GTTCATAATT ACGAGCATCA CACCTATACC
AACATTATTG GTAAAGACAG AGACTTTGGC TACGGTTTGC TTCGCTTGTC TAATGATTTT
AGATGGCGTG TAAAAAACTT ATGGCAGTTC GCAACTTATA TCGTACTTAG CGTTTTGTTT
CAGTGGGGTG TGTCGTACCA CGAAATGGCC GCTGAGCGGG TCTTTTTTGG AAAAAAGAAG
GACAACCGTA AGAACCAAGT TACCCATAAT GAACTTAAGA AACGCTTTTT CAGCAAAGGG
GCGCGTCAAT TAGTAAAAGA CTATGTGCTA TTTCCTCTGA TAGCTGGCCC CCTATTTTTA
TGGGTATTTG CAGGCAACCT TATTGCTAAC TTACTGCGCA ATTTGTGGAC GTCGACCATC
ATCTTCTGTG GTCATTTCAC TGGCGATGTA GAAACCTTCA AAGAAGAGGA TTGCAAAAAT
GAGAGTCGCG GTCAGTGGTA CTATCGTCAG GCCCTGGGAT CATCGAACAT CAAGGGCGGT
AACCTGTTTC ACGTACTGAC TGGGCATTTA AGCTTTCAAA TTGAGCACCA CCTGTTTCCA
GATATCCCAG CAAGACGCTA CAGAGAAATG GCCCCCAAGG TACAAGCCGT ATTCAAACAG
CACGGCATGC ACTACAACAC TGGCGGCTTT TTAAAACAAT ACGCCAGCGT GTTAAAACGC
ATTATTCGCT ACTCTTTCCC TTAA
|
|---|
| Protein sequence | MNTNVAIDNQ HREEAIKHAN LPMHETQETL ATQPTSARKK PNYEILAAQL DEIKADIKQK
VGAEDAAYIR RIIFIQRICE WSGRILLMLG FLQPLLWVAG VLSLATAKIL DNMEIGHNVM
HGQYDWMNDK HINSKGYEWD IACDGASWNR VHNYEHHTYT NIIGKDRDFG YGLLRLSNDF
RWRVKNLWQF ATYIVLSVLF QWGVSYHEMA AERVFFGKKK DNRKNQVTHN ELKKRFFSKG
ARQLVKDYVL FPLIAGPLFL WVFAGNLIAN LLRNLWTSTI IFCGHFTGDV ETFKEEDCKN
ESRGQWYYRQ ALGSSNIKGG NLFHVLTGHL SFQIEHHLFP DIPARRYREM APKVQAVFKQ
HGMHYNTGGF LKQYASVLKR IIRYSFP
|
|---|
| |