| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02769 |
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| Symbol | lysS |
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| ID | 6776364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3016087 |
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| End bp | 3017655 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642756215 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_002127059 |
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| Protein GI | 196157570 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.696158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGACC AACAAACAGA CGATAACAAA TTGATTGCAG AGCGCCGTGC CAAATTGAGC
GCTATTCGCG AGCAGTGCCG TGCCAACGGT TTCCCAAACA GCTTCCGTCG TGAAAACTAT
GCGGATGAGC TGCAAGCTAA GTTCGGTGAA TTCGACAAAG AAACCTTGCA AGAGCAGGGC
AACAAGGTAA GCATTGCTGG CCGTATTATG GCAAAGCGTG GTCCTTTCAT GTTGCTTCAA
GACATGACAG GCCGTATTCA AGCTTACGCA GACAAAGACA CGCAAAAAGC ACTTAAAGCA
AAATACGGTG CGCTAGATAT TGGTGACATC ATTGGCGTAG CGGGCGACCT GCACAAGTCA
GGTAAAGGCG ACCTTTACGT AAACATGGAG CAATACGAGC TGCTAACAAA AGCACTTCGT
CCGTTGCCAG AAAAATTCCA CGGTTTGAGC GACCAGGAAA CCAAGTATCG CCAGCGCTAT
GTTGACTTGA TCACAAGCGA ACAAACCCGC AAAACCTTTA TGATCCGCAG TAAAATTGTG
AATGGTATTC GCAATTACCT GACCGAGCGT GACTACCTAG AAGTAGAAAC GCCAATGCTA
CAGGTTATTC CAGGTGGCGC GACGGCGAAG CCGTTTGTCA CTCACCACAA TGCGCTAGAT
ATCGACATGT ATCTGCGTAT TGCGCCAGAG CTTTACCTTA AGCGTTTGGT TGTTGGTGGC
TTTGAGCGTG TGTTCGAAAT TAACCGAAAC TTCCGTAACG AAGGCTTATC AACCCGTCAT
AACCCTGAGT TTACTATGCT TGAATTCTAC CAAGCGTATG CAGACTACAA CGACCTGATG
AACCTTACCG AAGATATGCT GCGCACGTTA GCGGAAGACA TTCTTGGTAC CAGCATTATC
AAGAACACAA CGAAAGACGC TGAAGGTAAC GTAACGTCTG AAGTAGAGTA TGACTTTGGT
AAGCCGTTCG ACCGTTTGAG CATGGGCGAG GCGATTCTTA AATACTGGCC TGAAGCTGAT
GAAGCCGCTA TTCGCGACCC AGAAGCGAAC CTAGATTCGC TTAAAGCGAT GGCAAAGCAG
CTTCATATCA AAGAGCCTGA AGTTGACGGT ATTTGGGGCG CGGGTAAATA CCTGTGCGAA
ATCTTCGAAG CAACAGCTGA AGAGAAGCTT GAACAACCTA CGTTTATCAC TGAATACCCT
TGGGAAGTAT CGCCGCTAGC ACGTCGTAAT GACAACAACC CGTTCATTAC CGACCGTTTC
GAGTTCTTCG TAGGCGGACG TGAATTAGCC AACGGCTTTA GCGAGCTTAA CGACCCAGAA
GACCAAGCTG AACGTTTTGC AAAGCAAGTT GAAGAAAAAG ACGCGGGCGA TGATGAAGCC
ATGCACTTTG ACGATGACTA TATTCGTGCA CTTGAGTACG GCTTACCGCC AACAGCGGGT
GAGGGTATTG GTATCGACCG CCTAGCTATG CTATTTACCG ATAGCTCAAC TATCAAAGAC
GTTATCTTGT TCCCACATAT GAAGCCTCAA GCGCCGAAAG ACGCGCAAGA AGCCGGTGAG
CAAGCGTAA
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| Protein sequence | MTDQQTDDNK LIAERRAKLS AIREQCRANG FPNSFRRENY ADELQAKFGE FDKETLQEQG
NKVSIAGRIM AKRGPFMLLQ DMTGRIQAYA DKDTQKALKA KYGALDIGDI IGVAGDLHKS
GKGDLYVNME QYELLTKALR PLPEKFHGLS DQETKYRQRY VDLITSEQTR KTFMIRSKIV
NGIRNYLTER DYLEVETPML QVIPGGATAK PFVTHHNALD IDMYLRIAPE LYLKRLVVGG
FERVFEINRN FRNEGLSTRH NPEFTMLEFY QAYADYNDLM NLTEDMLRTL AEDILGTSII
KNTTKDAEGN VTSEVEYDFG KPFDRLSMGE AILKYWPEAD EAAIRDPEAN LDSLKAMAKQ
LHIKEPEVDG IWGAGKYLCE IFEATAEEKL EQPTFITEYP WEVSPLARRN DNNPFITDRF
EFFVGGRELA NGFSELNDPE DQAERFAKQV EEKDAGDDEA MHFDDDYIRA LEYGLPPTAG
EGIGIDRLAM LFTDSSTIKD VILFPHMKPQ APKDAQEAGE QA
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