| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02763 |
|---|
| Symbol | |
|---|
| ID | 6776290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 3008798 |
|---|
| End bp | 3010396 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642756209 |
|---|
| Product | glutamate cysteine ligase |
|---|
| Protein accession | YP_002127053 |
|---|
| Protein GI | 196157564 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2918] Gamma-glutamylcysteine synthetase |
|---|
| TIGRFAM ID | [TIGR01434] glutamate--cysteine ligase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.969679 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACTGTAG ACTCATCCCG TTTTGAAGCG CGCATAGCCG CGCTTAAGTC ACCCGAGTTC
CTAGCTGCGC TAAAAGATAT TAAGCGTGGA GTAGAGCGCG AAGCCCTTCG TATAAACCCA
AATGGCACTT TGGCACAAAC GCCACACCCC AAGCCGCTGG GATCAGCGCT GACTCACGAC
TCAATAACTA CAGACTTTTC AGAGTCGCTG TTAGAGTTTA TAACGCCACC AGAAAATAGC
GCGGCAAAAA CAATTTCTCA GTTAAAAGAT ATCCATAAGT TTGTCATTAA TAACATTGGT
GAAGAGCAAA TTTGGCCGCT TAGTATGCCT TGCTTCATTG AAGATGAAGC CGACATTCCT
ATTGCCTATT TTGGTGAGTC GAACGTTGGG AAAATGAAAC GGGTTTATCG TATTGGGCTT
AAAAACCGTT ACGGCAGCAT GATGCAGGCC ATTGCTGGTG TGCACTTTAA TTTCTCACTA
CCTGAAAGCT TTTGGAAGCT GTGGGCAGAG CTGAACGGAA AAGAATATTC GCAAGAACAA
GTTTCTGCAG ACTATTTTGG ATTAATTCGT AATTACCGTC GTCTTTGCTG GCTTATCCCT
TATCTTTATG GCGCGTCTCC GGCACTGTGT GGCTCGTTCT TAAAAGGTAA AAAGCATGCA
CTGCCATTTA AGAAGGTAGG CAAAGGCACT GTATATATGC CTTATGCAAC CTGTCTACGA
ATGAGTGATT TAGGCTATAC CAGTGCAGAG CAATCTTCAC TTAAAATTTG TTATAACCGG
TTAGATAATT ACGTTAAGCT GCTGCGCGAC GCTATGACAA CGCCTTCTTC ACGCTTTAGT
GAATTCACGG CAGGAGAAGA AGGAAATTAT CAACAGTTAA GTCGCAATAT CATTCAAATT
GAAAATGAAC TGTATTCACC TATACGCCCT AAGCAGCCTA CCGAGTCAAT GGAAAAACCA
ACAGACGCTT TGGTTCGTCG CGGTATCAGT TACATTGAAG TCCGCGCTCT AGACGTAAAT
CCGTTTACAC CCATAGGTAT CTCGCAAACG CAGTTTGACT TCTTAGATGT GTTCTTAGTG
GCGTGTTTAC TTATGCCAAG TGCAGAGCTA GATGAAGCTC AGCTTAAAGA AGCTAAAGAA
AACATGAATA AAGTGGTACT AGAAGGGAGA AATCCTGACT TAGTGCTACA GAACAATGGT
GTGGATACTA CACTGCCACA ATGGTGCGCA TCGCTGTTTC ACGTATTTGA GCAAGCTGCC
GAGCTATTGG ATTTGGCTAA CGACACTACG GCTTATTCGC AGGCGGTGAA AGCTGAATTT
GAAAAAGTGA AAAATCCAGA CATAACGCCG TCAGGCAAAC TGCTTGCTAT GTTGCTGGAA
GATGACAAAG ATAACGGCAT ACTTGGTCTT GAACTGGCGC AGGCGTATCA GGCGGAAATG
AAGTCTTTTG AGTATACCGA TACCGATGCT GCGGGTTTTG CCGCACAAGC TGAAGTGTCA
TTCTCCGCGC AAAAAGAGAT AGAAGCGTCT GACACTAAAG ACTTTGATAC ATTCATTCGT
GATTATTTCG CTGAAGCTCC TGCAAAAAAA AATGCCTGA
|
|---|
| Protein sequence | MTVDSSRFEA RIAALKSPEF LAALKDIKRG VEREALRINP NGTLAQTPHP KPLGSALTHD
SITTDFSESL LEFITPPENS AAKTISQLKD IHKFVINNIG EEQIWPLSMP CFIEDEADIP
IAYFGESNVG KMKRVYRIGL KNRYGSMMQA IAGVHFNFSL PESFWKLWAE LNGKEYSQEQ
VSADYFGLIR NYRRLCWLIP YLYGASPALC GSFLKGKKHA LPFKKVGKGT VYMPYATCLR
MSDLGYTSAE QSSLKICYNR LDNYVKLLRD AMTTPSSRFS EFTAGEEGNY QQLSRNIIQI
ENELYSPIRP KQPTESMEKP TDALVRRGIS YIEVRALDVN PFTPIGISQT QFDFLDVFLV
ACLLMPSAEL DEAQLKEAKE NMNKVVLEGR NPDLVLQNNG VDTTLPQWCA SLFHVFEQAA
ELLDLANDTT AYSQAVKAEF EKVKNPDITP SGKLLAMLLE DDKDNGILGL ELAQAYQAEM
KSFEYTDTDA AGFAAQAEVS FSAQKEIEAS DTKDFDTFIR DYFAEAPAKK NA
|
|---|
| |