Gene MADE_02755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02755 
Symbol 
ID6778902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp3003532 
End bp3004629 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content49% 
IMG OID642756201 
Productchorismate synthase 
Protein accessionYP_002127045 
Protein GI196157556 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0082] Chorismate synthase 
TIGRFAM ID[TIGR00033] chorismate synthase 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0341392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGGTA ACAGCTTCGG AAAACTTTTC ACTGTAACCA CGTTTGGCGA AAGCCACGGC 
ATCGCCATTG GTGGCGTGGT AGATGGTTGC CCTCCAGGAC TCGAAATTAC AGAAGAAGAC 
TTGCAGGTTG ATTTAGACCG ACGCAAGCCA GGCACTTCTC GCTATACCAC AGCGCGAAGA 
GAAGACGACG AAGTACAAAT TCTATCTGGC GTATTTGAAG GCAAGACTAC AGGCACTAGT 
ATTGGTTTGT TGATTAAAAA TAAAGATCAG CGAAGCCAAG ATTACGGCAA TATTAAAGAC 
CGCTTTCGCC CAGGTCATGC TGATTACACC TACGATCAAA AATACGGTAG CCGTGACTAT 
CGCGGTGGTG GTCGCTCGTC AGCCCGCGAA ACAGCTATTC GCGTAGCTGC TGGCGGTATC 
GCGAAGAAGT ACCTGAAAGA AGTGCATGGT ATCGAGGTGT TGGGGTATTT GTCTCAGCTT 
GGTCCTGTTA CGGTAGATAA GGTCGATCAC AGCGTTACCA ATACCAACCC GTTTTTCTGC 
CCAGATGAGT CTAAGCTAGA TGCGCTGGAC GAATACATGC GCGACCTGAA AAAGTCTGGC 
GACAGTATTG GCGCAAAAGT TTCAGTTGTG GCGAAGAACG TGCCAGTTGG CCTTGGCGAG 
CCTGTGTTCG ATAGGTTAGA TGCTGAAATT GCCCACGCCA TGATGGGGAT TAACGCGGTG 
AAAGGCGTTG AAATTGGCGA TGGTTTTGAT GTTATCAATC AAAAAGGCAG TGAACACCGC 
GATACGCTAA CCCCTGAAGG GTTTTCGTCA AACCATGCAG GCGGCGTATT AGGCGGCATT 
TCTACCGGCC AGGATATTGA AGTGCACATG GCACTTAAAC CGACCTCGAG CATTTCGGTA 
CCGGGTAAAA CTATCAATAA AGACAATGAA GAGATTGATA TTGTTACCAA AGGTCGTCAC 
GACCCTTGTG TGGGTATTCG CGCTGTACCC ATTGCAGAAG CCATGCTTGC GCTGGTATTA 
ATGGATCACT TGTTACGCCA CCGCGCACAA AATACAGGTG TGCTATCGAC GACTAAGCCA 
ATTGCGGGTC AGGCATAG
 
Protein sequence
MSGNSFGKLF TVTTFGESHG IAIGGVVDGC PPGLEITEED LQVDLDRRKP GTSRYTTARR 
EDDEVQILSG VFEGKTTGTS IGLLIKNKDQ RSQDYGNIKD RFRPGHADYT YDQKYGSRDY 
RGGGRSSARE TAIRVAAGGI AKKYLKEVHG IEVLGYLSQL GPVTVDKVDH SVTNTNPFFC 
PDESKLDALD EYMRDLKKSG DSIGAKVSVV AKNVPVGLGE PVFDRLDAEI AHAMMGINAV 
KGVEIGDGFD VINQKGSEHR DTLTPEGFSS NHAGGVLGGI STGQDIEVHM ALKPTSSISV 
PGKTINKDNE EIDIVTKGRH DPCVGIRAVP IAEAMLALVL MDHLLRHRAQ NTGVLSTTKP 
IAGQA