Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02753 |
Symbol | |
ID | 6778897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3000591 |
End bp | 3002138 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642756199 |
Product | SpoVR family protein |
Protein accession | YP_002127043 |
Protein GI | 196157554 |
COG category | [S] Function unknown |
COG ID | [COG2719] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCAG ATGCAATTGC AAAAGAAAAT GGCAAACCTG AATCATCACA ACGACATTTG TTGAGCGACG GCCCCGACTG GACATTTCCG CTTATCGAAG AATATGAGGA ACACATCGAT CGCATCGCTA AAAAGTTCAA GCTTGATACC TACCCCAATC AAATTGAGGT CATTACCGCC GAGCAAATGA TGGATGCCTA CGCCAGCATA GGCATGCCGC TTAACTATAC CCACTGGAGC TTTGGTAAAA AGTTTATTCA AACCGAGCAG CAATACCGTC GCGGGCAGAT GGGGCTTGCA TACGAAATAG TCATTAACTC TGACCCCTGC ATTGCCTATT TAATGGAAGA GAACACCATT ACCATGCAAG CCTTAGTCAT GGCCCACGCA TGCTATGGAC ACAATTCGTT TTTCAAAGGC AACTATCTAT TTGAGACATG GACTGACGCC AGCTCTATTA TCGATTACTT AGTATTTGCT AAAAACTATA TTGCTAAATG CGAGCAAAAG TACGGCTATG AAGACGTAGA AAATATGCTC GACTCCTGCC ATGCACTGAT GAATTACGGC GTTGACCGCT ACAAACGCCC GCAAAAGATT TCATTGCAAG AAGAGAAGAA CAGGCAGGAA GAACGCGAAG CCTACCTTCA ATCCCAGGTG AACGAACTAT GGCGCACACT GCCTAATAGC CCGCACAGTC AACACAAAGA AAAAATTCGT TTTCCTCAAG AGCCGCAAGA AAACCTGCTT TATTTCATTG AAAAAAACGC GCCACTTCTA GAGCCTTGGC AGCGTGAAAT TGTGCGTATT GTGCGCAAAG TTTCACAGTA TTTTTATCCG CAGAAACAAA CCCAGGTAAT GAACGAAGGC TGGGCCTGTT TTTGGCACTA TCATATTTTA AACCAGATGT ATGATGAAGG TTTAGTAAGC GACCGCTTTA TGATGGAGTT TTTACACAGC CATTCCAGTG TGGTTATGCA GCCTGAATAC AATAGCCCTT ATTATTCAGG CATCAACCCT TACGCCCTTG GTTTCTCGAT GTTTATGGAT ATCAAGCGCG TATGTCAGTC ACCCACGGAA GAAGATTATA AATATCTACC GAGTATTGCG GGTAAAGACT GGCTGGAAAC CGTGCATTTC GCCATGGAAA ACTTTAAAGA CGAAAGCTTT ATCAGCCAGT TTTTATCGCC AAAAGTGATT CGTGATTTCA AGCTTTTTTC ACTGGAAGAC GACACCTCCC AACCCTTTAT CAGCGTAAGT GCTATTCACG ATGAATTAGG CTATCAAACC ATTAAAGAAA AACTTTCGGC ACAATACAAC CTGAGCAATT TAGAGCCAAA TATACAGGTA CACAATGTGG ATGTTAGAGG CGACCGGTCG CTAACTCTTC GCTACATTCC ACAGCGCGGT GTTCCGCTAG GCGACTCGAA AGATGAAGTA ATGCGTCATT TACACAGGCT TTGGAAGTTC GATGTACGTC TTGAACAAGA CAATGGTGAT GACGGCGTTG ACGTAATATC GGAGTGTAAA CGCACACCGC AGGCTTGA
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Protein sequence | MTADAIAKEN GKPESSQRHL LSDGPDWTFP LIEEYEEHID RIAKKFKLDT YPNQIEVITA EQMMDAYASI GMPLNYTHWS FGKKFIQTEQ QYRRGQMGLA YEIVINSDPC IAYLMEENTI TMQALVMAHA CYGHNSFFKG NYLFETWTDA SSIIDYLVFA KNYIAKCEQK YGYEDVENML DSCHALMNYG VDRYKRPQKI SLQEEKNRQE EREAYLQSQV NELWRTLPNS PHSQHKEKIR FPQEPQENLL YFIEKNAPLL EPWQREIVRI VRKVSQYFYP QKQTQVMNEG WACFWHYHIL NQMYDEGLVS DRFMMEFLHS HSSVVMQPEY NSPYYSGINP YALGFSMFMD IKRVCQSPTE EDYKYLPSIA GKDWLETVHF AMENFKDESF ISQFLSPKVI RDFKLFSLED DTSQPFISVS AIHDELGYQT IKEKLSAQYN LSNLEPNIQV HNVDVRGDRS LTLRYIPQRG VPLGDSKDEV MRHLHRLWKF DVRLEQDNGD DGVDVISECK RTPQA
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