| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02732 |
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| Symbol | rnfD |
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| ID | 6775223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2976952 |
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| End bp | 2977980 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642756178 |
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| Product | electron transport complex protein RnfD |
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| Protein accession | YP_002127022 |
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| Protein GI | 196157533 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
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| TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATGG TGATATACGC CATGCTACCA GGCATGATTG CGCAATCCTT CTTCTTCGGC
TGGGGCATGC TGATACAAGC ATTTATTGCT GTAGTGAGCG CATTATTAAT CGAGGGCGTT
ATATTATTTT TAAGAAAACG TCCTATTGAG CGCACGCTAA CAGATTACAG CGCAGTATTA
ACTGGGCTAC TAATAGCCAT CAGTATCCCA CCTACCCTGC CTTGGTGGAT GACGGTAACT
GGCGTATTCT TTGCCATCGC TGTGGCTAAG CAAGTTTATG GCGGACTCGG GTTTAATATT
TTTAACCCTG CGATGATTGC TTACGTCGTC TTACTCATTT CTTTCCCAGC CGCTATGAGT
TTATGGCTGC CACCGGCGAC ACATGCGGGC ATAACGCCAA GCTTCCTCGA TTCGGTATCG
CTTATTTTCA CCGGTTTTAC CACCAGCGGC TACGATGTTA CTCAGCTTAA AACCATCGCA
GATGGGGTTA CGATGGCGAC GCCGCTAGAC ACATTAAAGA CAGATTTAAC ACAAGGCGTT
ACCTATACAG AGTCATTGAG CAAGCCAATT TTTAACGGCG GATTTTTTGA CGCTGCTGGC
GCAGGGTGGG GAATCGTTAG CATTGCCTAT CTATTAGGTG GACTGTATTT GTGGAAAACC
CGCGTAATTA GCTGGCATAT TCCAGGCGGC ATGCTTATAA GCGTAGCTGT GTGCGCATCA
TTACTTCATT TAGTTAACGC CGATTACTAT GCCTCGCCCT TGTTTCATTT ATTCAATGGC
GCAGTGATGG TTGGTGCATT TTTTATTGCA ACCGACCCTG TATCAGCATC GACCACACCG
AAAGGCAGAA TCATCTTTGG AGCCGCCATT GGTTTTTGGG TTGTGATTAT TCGTACTTTT
GGCGGGTATC CCGACGCTGT GGCCTTTGCG GTTATTATTA TGAATATGGC CGTACCTCTT
ATCGATTATT ACACCCGCCC GCGGGTATAC GGGAAAAATG TGAGCAAAGG TCGAGGTAAG
CCGCAATGA
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| Protein sequence | MRMVIYAMLP GMIAQSFFFG WGMLIQAFIA VVSALLIEGV ILFLRKRPIE RTLTDYSAVL
TGLLIAISIP PTLPWWMTVT GVFFAIAVAK QVYGGLGFNI FNPAMIAYVV LLISFPAAMS
LWLPPATHAG ITPSFLDSVS LIFTGFTTSG YDVTQLKTIA DGVTMATPLD TLKTDLTQGV
TYTESLSKPI FNGGFFDAAG AGWGIVSIAY LLGGLYLWKT RVISWHIPGG MLISVAVCAS
LLHLVNADYY ASPLFHLFNG AVMVGAFFIA TDPVSASTTP KGRIIFGAAI GFWVVIIRTF
GGYPDAVAFA VIIMNMAVPL IDYYTRPRVY GKNVSKGRGK PQ
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