Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02730 |
Symbol | |
ID | 6775290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 2973750 |
End bp | 2974331 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642756176 |
Product | electron transport complex protein RnfB |
Protein accession | YP_002127020 |
Protein GI | 196157531 |
COG category | [C] Energy production and conversion |
COG ID | [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB |
TIGRFAM ID | [TIGR01944] electron transport complex, RnfABCDGE type, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000653403 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATAT CTACTGCTAT TATTTTTGCC GTTATCGCTA TCGGGGCACT TGCCCTGATT TTCGGCCTTG TTTTAGGCTA CGCCAGCATT CGCTTTAAAG TAGAAGGTGA TCCGCTTGTA GAGCAAATAG ACGCGGTGCT TCCACAAACC CAATGTGGCC AGTGCGGCTA CCCAGGGTGT AAACCTTATG CAGAAGCTAT TGCTGAGGGT GATGATATAA ATAAGTGCCC TCCAGGCGGT GAAAGCACTA TTAAAAAGCT TGCTGATTTA ATGGGCGTAG AGCCTAAACC GCTTGATGCC GCTCACGGCG AGGAAGACGT AAAAAAAGTG GCGTTTATCC GCGAAGATGA ATGTATTGGA TGCACTAAGT GTATTCAAGC ATGTCCGGTA GATGCCATCC TAGGTGCTGC AAAACATATG CATACCGTGA TAACTGATGA ATGTACCGGG TGTGATTTAT GCGTAGACCC CTGCCCCGTT GACTGTATTG ACATGGTACC TATTACTCAA ACAACTTCTA CGTGGAAGTG GGACTTCTCT TCATCTCCAA AGGGTGATAT CCCCATAAAA ATGGTGTCGT AA
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Protein sequence | MTISTAIIFA VIAIGALALI FGLVLGYASI RFKVEGDPLV EQIDAVLPQT QCGQCGYPGC KPYAEAIAEG DDINKCPPGG ESTIKKLADL MGVEPKPLDA AHGEEDVKKV AFIREDECIG CTKCIQACPV DAILGAAKHM HTVITDECTG CDLCVDPCPV DCIDMVPITQ TTSTWKWDFS SSPKGDIPIK MVS
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