Gene MADE_02725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02725 
Symbol 
ID6776215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp2966838 
End bp2967494 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content48% 
IMG OID642756170 
Productputative regulator protein 
Protein accessionYP_002127015 
Protein GI196157526 
COG category[R] General function prediction only 
COG ID[COG0603] Predicted PP-loop superfamily ATPase 
TIGRFAM ID[TIGR00364] exsB protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAA ACGTTGTTGT TATCTATTCA GGAGGCATGG ACTCCTTCAC AGTATTGCAC 
AAAGCATTAA GAGCCGGAAA AAAAGTTCAC GCCCTTAGTT TTGATTATGG CCAGCGCCAT 
AAAAAAGAGC TCGATTACGC GGCCGCTGTG TGTACGTCTC TCGGTGTACC CCATAAAATT 
GTGGATATAA GTGCAATCAA CACCTTGATT GGTGGCTCTG CGCTAACGTC AGACATCGAC 
GTGCCCGAAG GGCATTACGA AGAACCAAGC ATGAAGCAAA CAGTTGTCCC TAATCGCAAT 
ATGATATTGC TTTCTCTTGC TGTTGGTTAC GCCGTCAGTC TTGATGCCAA CGAGGTCTAT 
TACGGCGCCC ACTCTGGCGA TCATGCTATT TACCCTGACT GTCGCCCCGA GTTCGTGCAC 
AAAATGAATG ACGTATGCGG CATTGCGAAC TATACCCCAG TGACTATTAT GACCCCCTAT 
ATCAAAGACA GTAAAACCGC CATCTTGACT GACGGGTTGT CAATGGGACT TGATTACGGG 
CAAACGTGGA CGTGCTACAA CGGCAGAGAA AAAGCCTGTG GGAAGTGTGG TGCCTGTGAA 
GAGCGCTTAG AAGCCTTTAA AGATAACGGT GCAACCGACC CGCTTGAATA CGAATAA
 
Protein sequence
MSENVVVIYS GGMDSFTVLH KALRAGKKVH ALSFDYGQRH KKELDYAAAV CTSLGVPHKI 
VDISAINTLI GGSALTSDID VPEGHYEEPS MKQTVVPNRN MILLSLAVGY AVSLDANEVY 
YGAHSGDHAI YPDCRPEFVH KMNDVCGIAN YTPVTIMTPY IKDSKTAILT DGLSMGLDYG 
QTWTCYNGRE KACGKCGACE ERLEAFKDNG ATDPLEYE