| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02711 |
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| Symbol | |
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| ID | 6775222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2949311 |
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| End bp | 2951128 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 642756156 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_002127001 |
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| Protein GI | 196157512 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.407326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATTT ACAATTGGAA TGAAGATACT GAAATAGACA ACCGACAGAT TGTATCTATG
TTAGAGAGTG CGGGCATTCA AAATGATGAT TCCAGTGAAG GCATTATTTT CAGGCACTTA
CTCGCCACAG GAACCGCAAA AGAAACGGTT AAGCCCCGCC TTCCAATCTA TGTAAAGCAC
CCGCTTTTAA AAGAGCATTG GGAAGAGTTA AAAGTACTCA ATGCCAAACT ATTTTCCGCG
GCAAAGGCCT ATTATATCTA TGCTAGAGCA GTAAACGACT TTGACGGTTC AGCACAACGA
ATCACCACCA CAGTCCCAGC ACTTAGACGT TTAAAATTAG AAGCTTTAGA TACCGGTGAT
AGAGTCGCTA CAGCAATCGC CAGTATCTGG TTATCAATGG AGCTTACTTT AGCAAGTCCA
ATACAGGCCA TTAATGAGAT TGAATATGCA CTTGCTTACT TACCCACGCG CTCTTCAACT
CTTTCTTTGG AAAATGCGTT AGATAGCTCG ACTGCTCATC AATGGCTTCG TGTTTCTTAC
ACAGAGCTAT CGGTGCCTAG TAGAGCTTAT TTTCACTCAA TGAAGGTTAT AGAAGAAAGA
AACCGAAATG ATGAGTTTGT AACATGGGCA TACTTTACCG CGGTTGACTC TTTACTACTT
CAAGGTAAAT ACGAAGAAGC CTTGCTACTG TCAGATAGAG CTCTGGAACA CGTGAAAAAT
CGAGATTCAG AACACGAGGT TTTCTTAACC TTATATCAAA AGCTAAGGGT GCTCCTAACG
GGTTTTAGAT GGCAGAATAA AAACGAAATA CATACTATTG TAAAAAAGAT GGATGCGATG
GATTTAGATA AGGTTAAATC CAGAGCTGAA GAGCTTTTTT ACCTTTACCA ATCTTATAAA
GCTATTGCTG AAAACGACAA GGAACGGCTT TCTGCAGCAA GTGAAAAATA TAAACAAGTG
ATGCTCGACA CCCTGCCCTC AACTGGGTTT AAAACTAAAC ACTTATTAAG TATAGAACTC
GAACTTTCGA GACTTTACGA CATCGTGGGC GACTATGAAA AGGCCTATAA ACATACCAAA
GCCTACAATC AGCTTTTAGT TAAGAAAAAT ACCGAGCAGT TTAAGCTTTC ATCTCCTTCG
CTCACCGATG GTATAGCAAG AAATATTGCG TTGGCACGCT ATCGCCAGCA AGAGCTTGCT
GCACTTCGCG ATGAAAAAAT CGGGCTGTCT ACCGATAAAG AAGCCATGAA AACAACCATT
TTCGCATTGA TAACGACCAT TTTAATTATT CTGGCGCTAT GGTTGTGGAT TGCTAAACGC
CAAAGCGACA CGCTTGCTGA GCGAGACTCA CTAACCGGCG CATTAACACG CAGAGCGATG
CTTAAAAGCC TTAAAAAAGC ATTAAAAAGT GACAGCACAT CCTGTGTTGC GCTGTTAGAC
GTAGATAACT TCAAAAAAAT TAACGACAAA CATGGGCATT TAGTAGGAGA TGAAGTGTTA
ACAACGCTTA CTCGAACTAT CCAAAAACGA ATTCGTAAAT CAGACAAGCT TTGCCGATAC
GGTGGCGAAG AGTTTTTAAT TTACTTCTCA GACACGGATC AACAATCAGC CAAGCGCATA
CTTGATGAAC TTAACGCTAG CTTATCTCGT CAAAAGCTGT GGAGCGGAAC CGACCAAAAA
TTTTCAGTCA GCTTTTCTTC TGGCCTTCTA GATGTGAACG GAGAAACAAA CTTAGACACA
ATTATCAAAG CCTGTGACGA CCTCTTGTAT AAAGCAAAAC GCGAAGGCCG TGCTCGCGTT
GCCGCTTTCT CATTTTAA
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| Protein sequence | MAIYNWNEDT EIDNRQIVSM LESAGIQNDD SSEGIIFRHL LATGTAKETV KPRLPIYVKH
PLLKEHWEEL KVLNAKLFSA AKAYYIYARA VNDFDGSAQR ITTTVPALRR LKLEALDTGD
RVATAIASIW LSMELTLASP IQAINEIEYA LAYLPTRSST LSLENALDSS TAHQWLRVSY
TELSVPSRAY FHSMKVIEER NRNDEFVTWA YFTAVDSLLL QGKYEEALLL SDRALEHVKN
RDSEHEVFLT LYQKLRVLLT GFRWQNKNEI HTIVKKMDAM DLDKVKSRAE ELFYLYQSYK
AIAENDKERL SAASEKYKQV MLDTLPSTGF KTKHLLSIEL ELSRLYDIVG DYEKAYKHTK
AYNQLLVKKN TEQFKLSSPS LTDGIARNIA LARYRQQELA ALRDEKIGLS TDKEAMKTTI
FALITTILII LALWLWIAKR QSDTLAERDS LTGALTRRAM LKSLKKALKS DSTSCVALLD
VDNFKKINDK HGHLVGDEVL TTLTRTIQKR IRKSDKLCRY GGEEFLIYFS DTDQQSAKRI
LDELNASLSR QKLWSGTDQK FSVSFSSGLL DVNGETNLDT IIKACDDLLY KAKREGRARV
AAFSF
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