| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02706 |
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| Symbol | |
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| ID | 6776505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2941721 |
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| End bp | 2943724 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642756151 |
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| Product | TPR domain protein |
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| Protein accession | YP_002126996 |
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| Protein GI | 196157507 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4372] Uncharacterized protein conserved in bacteria with the myosin-like domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTCG ACTTCTTAAA CCAATTTCAC TTTCTACGTC CAGAGTGGTT TGCAGCAATC
ATCCCCCTGC TGCTGCTTGT CATCTTAATA AGAAAGGCAA CGGCTAAACA GTCTGGCTGG
CAATCAGTAA TCCCTTCACA CCTTTATCAA TATATGGTGA TTGGAAAAAC AGAGGTGGGG
GCAAAACCAC CTATAATGCT GTTGGCTATT GCGTGGTTTG TGAGTGTGAT TGCATTGGCT
GGTCCAACGT GGGAGCGCTT ACCTCAGCCG GTATACCAGC TAAAGATGGG GCATGTGATT
GTGATAGACA TGTCGCTTTC TATGCGAGCA ACGGATATGA CGCCCGACCG ACTGACCCGC
GCTAAATATA AAGCGATAGA CTTAGTCAAT GCCATAGGTG AAGGCGAAAT GGGCCTTGTT
GCTTATGCTG GTGATGCCTT TGTTATTAGC CCCCTCACCG AAGACGCGGC GAATATTACC
ACTTTAATAC CCAGCCTTTC TCCTGAGATT ATGCCTGTAC CTGGCAGCGA CCCGCTTTTA
GGTATCGAAA GCGCCGCAGC GCTTTTAACC AACGCGGGCT ATAACTCGGG TATGATTTAC
TGGATAACTG ATGGTATAGA GTTAGCGCAG CAAAATGAAC TGCAAGAATA TGTCGCGTCT
ATTCCCTTTA CGCTAAATGC ACTTACCGTT GGCACAGCCG AAGGGGCGCC AATACGCCAG
CAAAGTGGTG AATTACTTAA AGATCACACA GGTAGTATCG TAATTCCTAA ACTTAACGAC
GACGCAGTTA GAGGTGTCGT CAAAACCAGC GGCGGTCGGT TTGAATCATT TACTTCAAAC
GATACCGATA TTGAAGCACT TGCCGCTATT TCATTGTTAG ATAAAGGCAA CAGTGAAGAA
GACGAAGAGG ATAACAATAT TCAAGGTGAC CAGTGGAAGG AAGTAGGCCC TTATCTGGTA
GTACTATTGT TGCCTTTGGC CGCTTTCGCA TTTAAAAGGG GCTTGGTTTT CTTACTTTTA
GTTGGATTAC TTAGCCCTCC TGTTATGCAA AAGGCCCATG CATTACAAGG CTCAGACGTA
GCAAGCGAAC GGCAATCAGG CATAGAAAAT TCAGCGCAGC CTAAGTCACT CTCGTGGTGG
CAAAAGCCAT TTATGAATGA CAATCAAGAA GCGTTAAATA GCTATCAGCG AGGCAAATAT
AAAGACGCGG TTAGCCAGTT TGACGATAAA TTGTGGAAGG CATCATCGCT TTATAAGTCG
GGGGAGTATG AGCGCGCACT AGCGGCTTTT GAAAATATTC CAGGCCCTGA AAGTTTGTAC
AATCAGGGTA ATGCGCTTGC CAAGCTTGGG AAACTTGAAA AGGCGATTGA AAAGTATGAG
CGAGCGCTAC AGGAAGCCCC TGATTTTGAA GATGCGAAGA CGAATAAGAA AATAATTGAA
GACTTATTGG AGCAGCAAGC GCAGCAAGAA AAGCAAAATC AGCAGCAAAA CCAGCAGCAA
GGTTCAGATC AAAATCAAAA CCAAGACAAC CAGCAGAATA ATGGTGAAGA TGATCAGCAG
CAGTCAGGCG AGCCCAATAA CCAAGATGGT GAGCAAAACG ACAATAGCGA CCAGCAGTCT
GGCCAAAACC AACAACAAAA CTCAACGGAA CAAAACGGGG AGCAGCAAAA CTCTGACAAT
GCAGAGAGGA GCGAGGACAG TGAGCCGTCT GAGCCTGAAC AACAGGAGCC GTCCAGTCAG
CAAAATAACG CGGACCAAGG TGAAAACGCG CAGCAAAATA GTGCACAAGC GCTAGATGAA
AAGGAATCGT CAGCACAGGA GGCCGAAGCA ATGCAAAGTC AAGCGGGCGA GCTATCCGAT
GCTGAAAAAG AAGAACTACA ACGAATGGAA AGTTTAATGC GTCGCGTGCC AGATGACCCC
GCATTCTTAT TAAAACGAAA AATGCAATTA GAAGCACAAA AGCGTCAGCG TCAACGTATG
CCTTCAAACC GGAGTGATTG GTAG
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| Protein sequence | MELDFLNQFH FLRPEWFAAI IPLLLLVILI RKATAKQSGW QSVIPSHLYQ YMVIGKTEVG
AKPPIMLLAI AWFVSVIALA GPTWERLPQP VYQLKMGHVI VIDMSLSMRA TDMTPDRLTR
AKYKAIDLVN AIGEGEMGLV AYAGDAFVIS PLTEDAANIT TLIPSLSPEI MPVPGSDPLL
GIESAAALLT NAGYNSGMIY WITDGIELAQ QNELQEYVAS IPFTLNALTV GTAEGAPIRQ
QSGELLKDHT GSIVIPKLND DAVRGVVKTS GGRFESFTSN DTDIEALAAI SLLDKGNSEE
DEEDNNIQGD QWKEVGPYLV VLLLPLAAFA FKRGLVFLLL VGLLSPPVMQ KAHALQGSDV
ASERQSGIEN SAQPKSLSWW QKPFMNDNQE ALNSYQRGKY KDAVSQFDDK LWKASSLYKS
GEYERALAAF ENIPGPESLY NQGNALAKLG KLEKAIEKYE RALQEAPDFE DAKTNKKIIE
DLLEQQAQQE KQNQQQNQQQ GSDQNQNQDN QQNNGEDDQQ QSGEPNNQDG EQNDNSDQQS
GQNQQQNSTE QNGEQQNSDN AERSEDSEPS EPEQQEPSSQ QNNADQGENA QQNSAQALDE
KESSAQEAEA MQSQAGELSD AEKEELQRME SLMRRVPDDP AFLLKRKMQL EAQKRQRQRM
PSNRSDW
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