Gene MADE_02668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02668 
Symbol 
ID6777758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp2899009 
End bp2899704 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content47% 
IMG OID642756109 
Producttranscriptional regulator, LysR family protein 
Protein accessionYP_002126958 
Protein GI196157469 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.687867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATAG AACATCTTAA GCTTTTCGTG CGTATTGCTA GCACTGCGAA TATCAGCCTC 
GCAGGGCGAG AGCTCAACAT ATCTCCTGCC GTGGCAAGTG CCCACATTGG CAAACTTGAA 
GACACCTTGG GTGTTCGGCT TATTCATCGT ACGACACGAA AAGTATCGCT TACCGACGAA 
GGCAAACAAT TTTTGCCCCA CGCACAAGAA GTGCTAGATA GTATTGAAAC GGCCCAAGCG 
GCGGTTGGTA GCGGAGCGCA AACCTTGCAA GGTACGTTGC GGGTAACCGC GCCAGCGTCG 
TTTGGTCGTA TGCATTTAGT GCCTGCCATC AACGAATTTT TGGAACAATA CCCAAAACTG 
AACATCGACT TCCGATTTAG CGATAGCATT TTAGATGTGG TAGAAGGCGG GTTTGATGTG 
ACGATTCGCG ATGCAGAGCT AAAAGACTCG AATTTACATG CAAAGAAACT CGCCGATGAC 
AAGCGTATTA TCGTTGCTTC TAAAAGCTAT ATAGAAAAAA ACGGCGCGCC ACAAACGCCG 
GCCGATCTTA AAAATCATAA AATCGTAAAT CTTACCGGCT TAGAAGTGTG GGACTTTAAA 
GGAAGCCACG GCACTATCTC AATTAAAACA CCTAATCACC TGCGAATGGA CAATGGAGAA 
GCCGTACGCG ACGCTGTATT CAAGGCTGCG GTTTAA
 
Protein sequence
MNIEHLKLFV RIASTANISL AGRELNISPA VASAHIGKLE DTLGVRLIHR TTRKVSLTDE 
GKQFLPHAQE VLDSIETAQA AVGSGAQTLQ GTLRVTAPAS FGRMHLVPAI NEFLEQYPKL 
NIDFRFSDSI LDVVEGGFDV TIRDAELKDS NLHAKKLADD KRIIVASKSY IEKNGAPQTP 
ADLKNHKIVN LTGLEVWDFK GSHGTISIKT PNHLRMDNGE AVRDAVFKAA V