| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02659 |
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| Symbol | |
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| ID | 6778252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2885072 |
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| End bp | 2886211 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642756100 |
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| Product | putative multidrug resistance protein |
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| Protein accession | YP_002126949 |
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| Protein GI | 196157460 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.196626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTG CACTACCTAT TGGTGTTTTA ATAGTAGGCT ACGTTGGGAT GAAAGGAATC
GAAGCCTCAG CCTCTGACTC AGTAATAACC GAAGAAGTTG ACACGCGCCC CACAGTAACT
ATTGAGGCGT TAGCCCCTGA AGATGTTCGG GTGCAGTTAA CCTCTTACGG TGAAATCACG
CCTTTAGAAA CCACTAACCT CGCGGCGCAG GTATCAGGAG AAGTTCAACA GTGGAACCCC
AAATTTGTCA GCGGTGGTTT AGTGAGAAGG GGGGAAACAC TTTTTGAAAT AGAAGCCGAT
GCTTATGAAG CCGCGCTATT AATGGCCGAG GCAAACCTTG CCAGCGCTGA AGCGCAGCTT
ATTCAAGAGC AAGCACAGGC CGACGTTGCG GCGCGAGAAG CGAAAACCAT GCCCAATGCT
CGCGTCACTG ACCTATACCT TCGTAAACCT CAAGTAATGA GTGCGAAAGC AGCGCTAAAG
TCGGCACAAG CCCAGCTTAA AATAGCGAAA CGGGATTTTG AAAACTGCAA AGTTAAAGCC
CCTTATGACG CGTTAGTTGT TTCAAGGGGG ATTAGTACCG GTGACTATGT TACTCAAGGT
ACGCCCGTTG CCGTAATTAA TAACATTGAG TACGCAGAAG TAACCTTCCC CGTGGCTGGC
TTTGACCGCG TCTTTCTTGC TGACAACACC ATTGGCAGTG AAATCGCTAT TGAAGTTGAT
GACATTCAAG GTGCTACGGT TAAAGGCACT ATTCACAGAG ATACAGGGGT TATAGACAAC
AATACGCGTA TGAGCTATTT CGTCGCGCGA ATTGAAGACC CTTATGCCAT CAACTCATCT
AAGCCAATTA TAAAGTTTGG TTCTTACAGC ACCATTGCGT TTGAAGGTAA AACGTTAAGT
GACGTGTACC GCGTACCTCA AGAGCTAATT ACCAATCGTC TTTTATGGAC ACTGGATGAC
GAAGATAGGT TAACGTCACA AAAAGTTACC GTGGTTCGTG AAGAAAATGG CGACTTTTTA
ATTCAGGGAG ACTTTAACGC GAATAAGGTT GTGATGAGCC TTCCAGAGTA CCCGCAAAAC
GGGATGCCCG TGAAGGTAAT TGAGACCACT ACCGACCTTG TGACAGCAAG CGCTAACTAA
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| Protein sequence | MKFALPIGVL IVGYVGMKGI EASASDSVIT EEVDTRPTVT IEALAPEDVR VQLTSYGEIT
PLETTNLAAQ VSGEVQQWNP KFVSGGLVRR GETLFEIEAD AYEAALLMAE ANLASAEAQL
IQEQAQADVA AREAKTMPNA RVTDLYLRKP QVMSAKAALK SAQAQLKIAK RDFENCKVKA
PYDALVVSRG ISTGDYVTQG TPVAVINNIE YAEVTFPVAG FDRVFLADNT IGSEIAIEVD
DIQGATVKGT IHRDTGVIDN NTRMSYFVAR IEDPYAINSS KPIIKFGSYS TIAFEGKTLS
DVYRVPQELI TNRLLWTLDD EDRLTSQKVT VVREENGDFL IQGDFNANKV VMSLPEYPQN
GMPVKVIETT TDLVTASAN
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