| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02642 |
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| Symbol | |
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| ID | 6776950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 2868296 |
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| End bp | 2869954 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642756083 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_002126932 |
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| Protein GI | 196157443 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATGC AAACGTTTGA TTACATTATT GTAGGTGCAG GTTCTGCCGG CTGTGTATTA
GCGAACCGCT TGTCGGAAAA CCCTAAACAC AAGGTGCTGC TGCTTGAAAC CGGTGGCTCT
GATAAAAGCA TTTTTATCAA AATGCCAACA GCGCTGTCTA TTCCTATGAA TACCGACAAG
TACGCGTGGC AGTTTAATAC CGAGAAAGAA CCTTATCTAA ACAATCGCGA AATGCACTGT
CCTCGCGGAA AGGTGTTAGG TGGCTCTTCT TCTATCAATG GCATGGTGTA TGTGCGCGGA
CATGCAAAAG ACTTTGATGA ATGGGAAGCC CACGGCGCAG AAGGCTGGAA TTACCAAGCC
TGTCTCCCGT ATTTTCAAAA AGCTGAAACC TGGTACAAAG GCAATGATGC TTACCGTGGC
GGCAATGGCG AACTGGGCGT CAATAACGGT AATGAAATGA AGAACCCGCT TTACACGGCC
TTCATTAAAG CCGGCGAACA AGCAGGCTAT GACATTACAA GCGACTACAA CGCCAAGCAA
CAAGAGGGCT TTGGCCCTAT GCACATGACC GTTAAAGATG GCGTGCGCAG TTCTGCGAGT
CGCGAATACC TAGACCCTGT TAAACACCGT AAGAATTTGA CCATCGTAAC AGGCGCACTG
GTAACTAAAG TTGTGCTAGA AGACAAAGTG GCTAAAGGCG TTGAGTATGT GGTTAACGGT
AAAACCGAAA CGGCACGTAC GTCTAACGAA GTTATTTTAA GCGCGGGCTC AATTGGCTCA
CCACATATCC TTCAATTGTC AGGTATTGGT GATAGCGAAG CCTTAGCCAA AGCGGGAATT
GACGTAAAAC ATCACCTGCC GGGCGTGGGT CAGAATTTGC AAGATCACTT GGAGTTTTAC
TTCCAATATA AATGCAAACA ACCGATTACG CTAAACCGCA AACTAGGTCT TATTTCAAAG
GGCCTTATTG GTGCCCGTTG GTTGCTAAAC CGCTCTGGTT TAGGAGCAAC AAATCATTTC
GAATCGTGCG CTTTTATCCG TTCTAAGGCC GATGTGGAAT GGCCTGACAT TCAATACCAC
TTCTTGCCTG CGGCCATTCG CTATGACGGA AAGTCAGCGT TTGACGGCGA TGGCTTCCAA
GTTCACGTAG GGCATAACAA GCCTAAAAGT CGAGGCAGCG TCACTATTCA GTCAGCCGAC
CCAACGGTGC CGCCTAAGAT TTTGTTCAAC TACCTACAGC ACCAAGATGA TATTGAAGGG
TTTAGAGCAT GCGTAAGACT TACAAGAGAA ATTATCGCTC AGTCAGCATT CGACGACTTC
AGAGACGGCG AAATACAGCC TGGCGAACAC ATTCAGACGG ATGAAGAAAT AGACGCCTTT
GTACGTGAAG CTGTTGAAAG CGCCTACCAC CCATCGTGTT CTTGCAAAAT GGGCGAAGAC
GACATGGCGG TCGTGAACTC ACAAACGAAA GTTCACGGCA TTAAAGGCCT GCGAGTGGTC
GATTCATCTA TTTTCCCAAC TATTCCAAAC GGCAACTTGA ATGCGCCAAC CATTATGGTG
GCAGAAAAAG CTGCGGATAT GATTTTGGGT AAGCCGGCGC TGCCATCACA GGACGTACCT
GTGTCTATTC ACCCGAATTG GCAAACCGAA CAGCGCTAA
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| Protein sequence | MNMQTFDYII VGAGSAGCVL ANRLSENPKH KVLLLETGGS DKSIFIKMPT ALSIPMNTDK
YAWQFNTEKE PYLNNREMHC PRGKVLGGSS SINGMVYVRG HAKDFDEWEA HGAEGWNYQA
CLPYFQKAET WYKGNDAYRG GNGELGVNNG NEMKNPLYTA FIKAGEQAGY DITSDYNAKQ
QEGFGPMHMT VKDGVRSSAS REYLDPVKHR KNLTIVTGAL VTKVVLEDKV AKGVEYVVNG
KTETARTSNE VILSAGSIGS PHILQLSGIG DSEALAKAGI DVKHHLPGVG QNLQDHLEFY
FQYKCKQPIT LNRKLGLISK GLIGARWLLN RSGLGATNHF ESCAFIRSKA DVEWPDIQYH
FLPAAIRYDG KSAFDGDGFQ VHVGHNKPKS RGSVTIQSAD PTVPPKILFN YLQHQDDIEG
FRACVRLTRE IIAQSAFDDF RDGEIQPGEH IQTDEEIDAF VREAVESAYH PSCSCKMGED
DMAVVNSQTK VHGIKGLRVV DSSIFPTIPN GNLNAPTIMV AEKAADMILG KPALPSQDVP
VSIHPNWQTE QR
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