| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02636 |
|---|
| Symbol | rbgA |
|---|
| ID | 6776481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 2861764 |
|---|
| End bp | 2862735 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 642756077 |
|---|
| Product | ribosomal biogenesis GTPase |
|---|
| Protein accession | YP_002126926 |
|---|
| Protein GI | 196157437 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1161] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACAAAG CCCTTAAAGA AATAAAAGAG TCACTTAATC AAGTTGATAT TCTTATTGAA
GTATTAGATG CGCGAATTCC TTATTCGAGC GAAAACCCCG AGATTGCCAA AATTCGGGGC
GACAAGCCGT GTATCAAAAT TCTTAATAAA TACGACTTGG CAGACCCAGA ATTAACCGCC
CTATGGCAAG AAAGCCTCGA AAAAGAACGG GGGGTTAAAA CCATAACCAC ATCGAGTGAC
AACCCGGGTA ATAGCAAGCA ACTCATGCAG TTGATTCGCA GTATTTGTTC CTATAAAGAA
GGCCAGCCAA AAGCGATAAA AGCAATGATC ACGGGTATTC CAAACGTAGG AAAGTCCACA
CTGATTAATA TCCTTGCAGA TCGAATAATT GCGAAAACAG GTAATGAACC CGCCGTAACG
AAAAGTCAGC AACGCATCAA TTTAGGCAGC GGCATTATTT TATTCGATAC CCCAGGGGTA
CTGTGGCCTA AACTAGAAAA CCCGAACTCT ATATATCGAT TAGCTTCATC TGGCGCGGTA
AAAAATACTG CTATGGAATA TGACGATGTT GGCTTTTTTG CTGCCGACTA TCTAATTAAA
GCCTACCCAG AAGTAATGAA AGAGCGTTTC AAGCTAGACG AGCTTCCTTC AACTGAAATT
GAGTTTTTAG AAGCAGCGGC AAAAACGCGT GGTGCTATCG CTTCGGGGGG ACGGGTTAAT
TTACATAAAA TCTGTGAGAT CCTTCTTAAG GAGTTGCAGT CTGGTAAGCT TGGTCGGGTC
ACCTTAGAAA CGCCAGAAAT GCTAATTTGT GAAAAAGAAG AAATGGCTAA GGCTGCCGCT
AAAAAAGCCG AGGCAAAAGC AAAAAGAAAA GAGAAGTTCA AAACTGGCTC TCTAACGCCT
GACAAAAAAG ATAGAAAAGA AAAGCGCGAG GAAAAGCGCC AAGAACAAAG CCGCAGAATG
CGTAAAAAAT AA
|
|---|
| Protein sequence | MHKALKEIKE SLNQVDILIE VLDARIPYSS ENPEIAKIRG DKPCIKILNK YDLADPELTA
LWQESLEKER GVKTITTSSD NPGNSKQLMQ LIRSICSYKE GQPKAIKAMI TGIPNVGKST
LINILADRII AKTGNEPAVT KSQQRINLGS GIILFDTPGV LWPKLENPNS IYRLASSGAV
KNTAMEYDDV GFFAADYLIK AYPEVMKERF KLDELPSTEI EFLEAAAKTR GAIASGGRVN
LHKICEILLK ELQSGKLGRV TLETPEMLIC EKEEMAKAAA KKAEAKAKRK EKFKTGSLTP
DKKDRKEKRE EKRQEQSRRM RKK
|
|---|
| |