| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02630 |
|---|
| Symbol | upp |
|---|
| ID | 6775875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 2854902 |
|---|
| End bp | 2855531 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642756071 |
|---|
| Product | uracil phosphoribosyltransferase |
|---|
| Protein accession | YP_002126920 |
|---|
| Protein GI | 196157431 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0035] Uracil phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.527384 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTTC ACGAAATAAC TCACCCGCTC ATTGCCCATA AACTCGGGCT TATGCGACAT
GGTAATATTA GTAGTAAGGA CTTTCGCGAA CTCGCATCTG AAGTAGGAAA CCTTCTTACC
TATGAAGCAA CGCGAACACT ACCTACCGAA CGGGCAACCA TTAAAAGCTG GTCTGGCGAC
GATGTGGAAG TGCGGCAGAT CAAAGGTAAA AAAATTACGG TTGTGCCCAT TCTTCGTGCC
GGCCTAGGTA TGCTTGAAGG TGTACTTGAG CTTATCCCCA ATGCAAAAAT CAGCGTTGTT
GGGCTTTATC GCGATGAAGA AACGCTTCAG CCGGTGGCTT ACTTCGACAA GGTGGTTAAA
AACATTGATG AACGTACGGC GCTTATTGTT GACCCTATGC TTGCTACAGG TGGCACCTTA
ATTGCGACCA TAGACTTACT TAAGAAAAAA GGGTGTACCA AAATAATGGG GCTTTTTCTT
GTAGCCGCTC CCGAAGGAAT TAAAGCGGTT GTTGATGCTC ACCCTGATGT TGATATTTTC
ACGGCAGCCG TAGACGAACG CTTGAACGAA AAAGGCTACA TTTTGCCGGG GTTAGGTGAT
GCTGGTGATA AGATTTTTGG AACGCGCTAA
|
|---|
| Protein sequence | MAVHEITHPL IAHKLGLMRH GNISSKDFRE LASEVGNLLT YEATRTLPTE RATIKSWSGD
DVEVRQIKGK KITVVPILRA GLGMLEGVLE LIPNAKISVV GLYRDEETLQ PVAYFDKVVK
NIDERTALIV DPMLATGGTL IATIDLLKKK GCTKIMGLFL VAAPEGIKAV VDAHPDVDIF
TAAVDERLNE KGYILPGLGD AGDKIFGTR
|
|---|
| |