| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02621 |
|---|
| Symbol | |
|---|
| ID | 6776356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 2842596 |
|---|
| End bp | 2843600 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642756062 |
|---|
| Product | hypothetical maturase |
|---|
| Protein accession | YP_002126911 |
|---|
| Protein GI | 196157422 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3344] Retron-type reverse transcriptase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCAAC AATGCTTGAA TGACCTCCTT ACACCCATCT TCGAAGAGCA GTTCCATCCA
TCAAGCTTTG GTTATAGACC GAAGCGGAGC TGTCACGATG CCATTAATAA AGCCACCATG
TTCATCCGTC GATACGGACG GCGACACGTG GTGGATATGG ACCTGTCGAA GTGCTTCGAT
AAGCTGGACC ATACGCTTAT CATTAAGAGC ATCAAAAGGC GGGTGCGTGA TGGCAGCGTG
TTGAAGTTAA TTACTCAGTT CTTAGAAAGT GGGGTAATGG TTGATGGGCA TTGGCAGCAG
ACAGAGACAG GCAGTCCGCA AGGTGGGGTA ATAAGCCCGC TCATAGCGAA CATCTATCTG
GATGCGTTCG ATAAGGAAAT GAAAGAGCGA GGGCACCGCA TAGTGCGCTA TGCTGATGAC
ATCCTGATTT TGTGTAGCAG TCGTGCAGCG GCAGAGAATG CCAAAGCGCA AGCCACACAT
ATCTTAGAAG AGAAACTAAA GCTAAGTGTA AACACGGATA AAACACACAT CACTCACAGT
GATGATGGTG TGAAGTTCCT TGGTGTTGAA ATTGGGACGA AATATACCCG CATCCAGCCC
AAGAAACTCA CCGCGTTTAA GGCGAAGCTC AAGCAGATGA CGAAACGCAA TGGCGGAATG
CCGCTGCAAT CAGTTATCAA TGCACTAAAC CCACTGCTAA GAGGGTTCAG TTATTACTTC
AAGATAGCCA ATGCGAGCAG GGCATTTAAG CAAATAGCAA GCTGGCTAAG ACGCCGCTTG
CGCAGCATTC AACTCAAGTT ATGGAAAAAG GCGAGCCGCC TCCATCGCTG GCTAAGACAG
CACGGTTATA AAGGTCAGTT TGCTCATATC AACATGACGA GTTGGTGCAG TGCACGCAGT
CCCTTAGCAA GCTACGCAAT GCCAAACAGT TGGTTTGATG AAATCGGGCT AATGAACTTG
GAGAATGTTG CAACGGGATA TGTGTTTAGC AATTACGCTA AATAA
|
|---|
| Protein sequence | MVQQCLNDLL TPIFEEQFHP SSFGYRPKRS CHDAINKATM FIRRYGRRHV VDMDLSKCFD
KLDHTLIIKS IKRRVRDGSV LKLITQFLES GVMVDGHWQQ TETGSPQGGV ISPLIANIYL
DAFDKEMKER GHRIVRYADD ILILCSSRAA AENAKAQATH ILEEKLKLSV NTDKTHITHS
DDGVKFLGVE IGTKYTRIQP KKLTAFKAKL KQMTKRNGGM PLQSVINALN PLLRGFSYYF
KIANASRAFK QIASWLRRRL RSIQLKLWKK ASRLHRWLRQ HGYKGQFAHI NMTSWCSARS
PLASYAMPNS WFDEIGLMNL ENVATGYVFS NYAK
|
|---|
| |