Gene MADE_02601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02601 
Symbol 
ID6778967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2824397 
End bp2825296 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content42% 
IMG OID642756042 
Productputative exopolysaccharide biosynthesis protein 
Protein accessionYP_002126891 
Protein GI196157402 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0489] ATPases involved in chromosome partitioning 
TIGRFAM ID[TIGR01007] capsular exopolysaccharide family
[TIGR03018] exopolysaccharide/PEPCTERM locus tyrosine autokinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.067455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAACA CAATAGAAAA AGCGCTACAA AAGCAAGCCG CACAAAAACA AACGGACCCA 
AAAAATAATT CTCCAGAGCC TGAGGTGAAT GAAGTACCTG AACTCAATCA AAAGGTAGAT
TTGGCAAAAA AGGAAGGTTC AGAGCCATCT GGTATCAAGC AAAAACACAA ATTCAAGCTC
AATTTTGAAC AGCTTGAAGA AAGAGGCTTT GTATCAACGA CAGGTCAACG AAAGCAAATT
AATGAAGAGT ATCGAGAGAT AAAACGAAAG CTATTGGCAA ACGCGTTCGG CCCAATCTCA
AAGACGCTGA GTAATAGTAA TGTCATTATG GTGACCAGCG GTCGCCCTTC GGAAGGCAAA
ACATTCACTG CAGCAAACCT GGCGTTGAGT ATCGCATCTG AGCAGGACAA AACCGTACTT
CTAGTGGACG CAGATGTGCT CAAGCCCAAT GTGCTGCGAA CTCTTGGCCT CGAGAGACGT
AAAGGATTAA TGGAGTATTT GATGGGCGAA GTCGAAGAAG TTTCAGATGT TCTTTACCCT
ACAAATATAG ATACACTTAA AATTATACCT GCAGGTAAAT ACGATCATAG AACCACTGAA
CTATTAGCTA GCCAAAGGAT GCACGATACG GTTGATGAAT TTGCCAACCG TTATAAAGAC
CGCGTAGTGA TTATTGATAC GCCACCACTT ATTGGCATCA CCGAGTCGGC AGTGCTTGCT
AATTTCGCTG GGCAAGCGGT GGTTGTTGTG GAGGAAGGCC GTTCGAAGTT AAATGATATA
AAATTTTCAA TTGAAAGGTT AAACCCTGAG ATGGCTGTTG GTTTCGTTGT TAATAAGTCC
ATCGACAGTA GTTCGCTAAA TGGATATTAT GGATATTACT ATGCCGAACG AAATGATTAG
 
Protein sequence
MKNTIEKALQ KQAAQKQTDP KNNSPEPEVN EVPELNQKVD LAKKEGSEPS GIKQKHKFKL 
NFEQLEERGF VSTTGQRKQI NEEYREIKRK LLANAFGPIS KTLSNSNVIM VTSGRPSEGK
TFTAANLALS IASEQDKTVL LVDADVLKPN VLRTLGLERR KGLMEYLMGE VEEVSDVLYP
TNIDTLKIIP AGKYDHRTTE LLASQRMHDT VDEFANRYKD RVVIIDTPPL IGITESAVLA
NFAGQAVVVV EEGRSKLNDI KFSIERLNPE MAVGFVVNKS IDSSSLNGYY GYYYAERND