| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02597 |
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| Symbol | |
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| ID | 6778952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 2819778 |
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| End bp | 2820590 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642756038 |
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| Product | Polysaccharide deacetylase |
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| Protein accession | YP_002126887 |
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| Protein GI | 196157398 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR03006] polysaccharide deactylase family protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.14174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGTAG AAGACTACTT CCAAGTGTCA GCCTTTGAAA ATGTTTACAC TCAGAAAGAG
TGGGATAAAG CGCCTTTAAG GGTTGATCAC AACACAAACC GACTACTAGA CCTATTCGCA
GAACATGAAG TAAAAGCCAC GTTTTTTACA TTGGCGTGGG TAGCACAAAA ATGTCCATCT
TTAATAAAGC GAATTGTTAA CGAAGGCCAT GAGTTGGCAA GTCACGGTCT TGCCCACAGA
AGGGTGACAA CCATGTCGCC CGAAGAGTTT CGAAAGGATG TCAGCGAAAG TAAGCAGATT
CTGGAAGATA TAGGCGGAGT TGCAATAAAT GGTTATCGCG CCCCAAGCTT TTCCATTAAC
AGTGACAACG AGTGGGCTTT CGAGATAGTA AAAGAAGCGG GGTTCTTATA TTCGTCTAGC
ACCTACCCAA TTGAACATGA TTTGTACGGT GTGCCTGATT GGCCTCGGTT TAAATACCAA
CGCATAGAGG GGCTTTGGGA GCTGCCCATT CCTACAATAA GGAAATCTGG GAAAAATGTT
GGTATAGGGG GAGGTGGTTT TTTCCGTCTT TATCCTTACT GGTACTCGAA GAAACGTATA
GACACGTTCT TTGCTTCTGA ATCAGCGCCA TACAATTTTT ATTTCCACCC GTGGGAAATA
GACCAGCAAC ACCCTCAAGT GAAAGGGGCA CAACTTAAGT CCAAATTCCG ACATTTTGTA
AATCTTAAAA AAATGGAGTC GAAAATCGTT CGCCTGTTGG AAGACTACAA CTGGACAACA
ATGAGCTCGG CTTACGATAT TAGAACCGTG TAG
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| Protein sequence | MDVEDYFQVS AFENVYTQKE WDKAPLRVDH NTNRLLDLFA EHEVKATFFT LAWVAQKCPS
LIKRIVNEGH ELASHGLAHR RVTTMSPEEF RKDVSESKQI LEDIGGVAIN GYRAPSFSIN
SDNEWAFEIV KEAGFLYSSS TYPIEHDLYG VPDWPRFKYQ RIEGLWELPI PTIRKSGKNV
GIGGGGFFRL YPYWYSKKRI DTFFASESAP YNFYFHPWEI DQQHPQVKGA QLKSKFRHFV
NLKKMESKIV RLLEDYNWTT MSSAYDIRTV
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