Gene MADE_02588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02588 
Symbol 
ID6778523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2809529 
End bp2810374 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content43% 
IMG OID642756029 
ProductGlycosyl transferase, family 2 
Protein accessionYP_002126878 
Protein GI196157389 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.156049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTTG CACCCGAGGT AACTATCACA CTTACGCGTT ACGCAGAGCC CAACTGGCTG 
TTTTTGGAAA CGCTAACATC GCTCTCGCAA CAAGCCAATA TAAGCGCTCA TGTATTAGTT
TTGGACCAGC AAGATAATGA AGAGGTTAGG TCATTTTGTG TCAACAATTC ATCTAGCGTC
ATAGTGCTGG ATTACCATGT CATTCCGGCG AAGAGTCTAT CGTTTGCGCG CAATGAAGCA
ATTAGAATGT GTCAGACGGT ATTGCTTTTG TATATTGACA CCGATGCCGT TGCGGATCCA
AATTGGGCGT ATGAACTATT CGTTGCAATG CGCCAAAATA AGGCCGCAAT AGCGGGTGGG
AAAATAATTC CCAAATGGCA TAAAAAGCCG GGCTTGCTTC AACGAAGCCA AGTTGTTCTT
GACCAATATT CGATGCTAGA TCTTGGTGAT GATACAATTA ATGTTAAAAA AGTCATTGGC
GCAAATTTTG CCATTAATAA AGCAAAGTTA GCTAAATTAG CTTATTTTGA CGAAGGCTTG
GGTCGACAGA ATGGCAAGCT GTTAGGTGGT GAAGAAACAA AACTTTGTAC TGATGCCAGA
GAAAAAGGGT TAAGTGTTAT TTACGTTGGA AAAGCCGCTG TTTACCACCA AGTTATGCCG
GAAAGAGTAA ACTTTAAATG GATTTCAAAG CGAATGTATT ACGGTGGTTA CTCGAGAGCG
CTACGCGGAG GTAAACCCGA GCCAAGTAAT GGCGGCGGAC TGGCTGGATG GGATTACGTT
GCGCTGATAT TTTTATTGCC GTTTTACGCT TCTGGCTTTA TTCGTGCCAA AATGGATAAC
AAATAA
 
Protein sequence
MSFAPEVTIT LTRYAEPNWL FLETLTSLSQ QANISAHVLV LDQQDNEEVR SFCVNNSSSV 
IVLDYHVIPA KSLSFARNEA IRMCQTVLLL YIDTDAVADP NWAYELFVAM RQNKAAIAGG
KIIPKWHKKP GLLQRSQVVL DQYSMLDLGD DTINVKKVIG ANFAINKAKL AKLAYFDEGL
GRQNGKLLGG EETKLCTDAR EKGLSVIYVG KAAVYHQVMP ERVNFKWISK RMYYGGYSRA
LRGGKPEPSN GGGLAGWDYV ALIFLLPFYA SGFIRAKMDN K