| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02584 |
|---|
| Symbol | |
|---|
| ID | 6778390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 2805979 |
|---|
| End bp | 2806776 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642756025 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase, cyclophilin-type |
|---|
| Protein accession | YP_002126874 |
|---|
| Protein GI | 196157385 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000223944 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACTTTA AACGTCATAA AAATATGTCC AAACACGCAC ACCACACTAC ATCACTGGGG
CAAAACTTAT TTTGCTCAAC GGTGTATGGC GCAATTACCG CGCTATATTT ATTAACTAAT
ACTGCGCTTG CTGGCAAAGA AGACAACGAA AGCCAAGTAC TTACTACCCA AATAAGCAGT
AATGTTAAAG AGAAAATACC GAGCGTTTCA GATAATTCAA CAAAACAAGA TAACGCCATT
TTGCACAGCA ATAGCGCGAG TTGGTATCAG GTTCCTAAAA GCAATACGGT GACCTTTGCT
ACGGCTTACG GCGACGTGGT TATTGCGCTA CACCCTGCCC TAGCGCCCAA ACACGTTGCC
CGATTTAAAA AGCTTATCGA TGCAGGCTTT TATAACGAAC AGGCATTTTA TCGTGTAGTG
GATGGATTTG TTGCGCAAGC GGGAAGTAAT GATACCCATG ATGTATCTCA GTTTGACTCC
GCGTTACTAA GCACAATTGA TGCTGAATTT ACCCAGCCAC TTAATAGCAA CGTGCATGTG
GTGGAAACTA ACGATATGTT TGCACCGAGC ACAGGTTTTT TAGACGGGTT TCCTGTGGGT
ATAGACAGCA CTCGCGCTGA AATGTGGGGG CTGCATTGCC CTGGCGTTGT GGCTTTTGCG
CGCAATAGCG AAAAAGATAC CGCGAGTACC GAGTTTTATA TCGTACTTGG TCAAGCACCC
CGCCACTTAG ACAGAAACAT GTCGGTAGTA GGGCGGGTTG TTAAAGGCAT GGAGCTACTT
CAAAAATTAC CGCGATGA
|
|---|
| Protein sequence | MHFKRHKNMS KHAHHTTSLG QNLFCSTVYG AITALYLLTN TALAGKEDNE SQVLTTQISS
NVKEKIPSVS DNSTKQDNAI LHSNSASWYQ VPKSNTVTFA TAYGDVVIAL HPALAPKHVA
RFKKLIDAGF YNEQAFYRVV DGFVAQAGSN DTHDVSQFDS ALLSTIDAEF TQPLNSNVHV
VETNDMFAPS TGFLDGFPVG IDSTRAEMWG LHCPGVVAFA RNSEKDTAST EFYIVLGQAP
RHLDRNMSVV GRVVKGMELL QKLPR
|
|---|
| |