Gene MADE_02576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02576 
Symbolipk 
ID6778265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2798587 
End bp2799504 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content46% 
IMG OID642756016 
Product4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 
Protein accessionYP_002126866 
Protein GI196157377 
COG category[I] Lipid transport and metabolism 
COG ID[COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 
TIGRFAM ID[TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000457981 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATCTG TAGTGAATTC ATCAGAAACA AAACAAAAAG ATTGGTGGCC TTCCCCAGCA 
AAACTAAACC TTTTCCTGCA TATACTTGGC CGATACGACA ACGGATATCA TCAGCTACAA
AGCTTGTTTC AAATGCTTGA TTACGGCGAT GAGCTGGCGT TTGACGTTAC TTGTAGTGCG
GCAAGTGACA CAGACAAAGA ACGTACCGAG GGAAATGCGC CAACCATTCG TATGGATATA
CCGTTAAAAG GTGTACCGGA CGACGATAAT CTCATTATCA AGGCGGCCCG ATTACTTGCA
CAGAAAACAC AATGTAATAA AGGTGCGGTT ATCTCGTTGA ATAAGCGCCT TCCTATGGGC
GGTGGCATTG GCGGCGGGTC GTCTAATGCT GCTACTACCT TGGTTGCCCT TAATCACCTG
TGGCAAACCG GCCTTAGTGA AGATGAATTG TCGGCGTTAG GGTTAACGCT TGGCGCTGAC
GTTCCCATTT TCGTGCGTGG TTTAACCGCA TTTGCCGCTG GCGTAGGTGA AGACATTACC
CCTGCCCCAC AACAGGAACA CTACTTTTTA GTTGCAACGC CTAATGTTCA TATCAGCACT
GCTGACGTTT TCACCTCGCC AGATTTGCCG AGAAATACAC CGGCAATACG TTGGGAAGAC
TACGAATTTG AAAAAACTCG CAATGATTGT CAGCAATTAG TCGTTAATCG CTATCCTGAA
GTTGCAAAAT TATTACAGTG GTTGGTACAC TACGCACCGT CGCGAATGAC GGGCACAGGT
GCAAGCGTGT TTGCCACTTT TTCTGACTAT ACTTTAGCCG AACAAGTTAG GGCCAAAATG
CCTGATACTT GGCAGAGTTT TGTCGCAAAA GGTGTAAATC GCTCACCACT ATTAGACAAA
TTAGAACAAC AAAGATAG
 
Protein sequence
MESVVNSSET KQKDWWPSPA KLNLFLHILG RYDNGYHQLQ SLFQMLDYGD ELAFDVTCSA 
ASDTDKERTE GNAPTIRMDI PLKGVPDDDN LIIKAARLLA QKTQCNKGAV ISLNKRLPMG
GGIGGGSSNA ATTLVALNHL WQTGLSEDEL SALGLTLGAD VPIFVRGLTA FAAGVGEDIT
PAPQQEHYFL VATPNVHIST ADVFTSPDLP RNTPAIRWED YEFEKTRNDC QQLVVNRYPE
VAKLLQWLVH YAPSRMTGTG ASVFATFSDY TLAEQVRAKM PDTWQSFVAK GVNRSPLLDK
LEQQR