Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02565 |
Symbol | |
ID | 6777928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 2790190 |
End bp | 2790861 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642756005 |
Product | predicted hydrolase of the alpha/beta-hydrolase fold |
Protein accession | YP_002126855 |
Protein GI | 196157366 |
COG category | [R] General function prediction only |
COG ID | [COG3571] Predicted hydrolase of the alpha/beta-hydrolase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.111578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAACA AAGCCGAATC ACACACTTTC GATATTGAAG TGCATCACGC GAATAATCCT GTTGCCTGTC TCGTTTTAGG GCATGGTGCT GGCGCGGGCA AAGAGCATGA CTTTATGCAA GATATGGCGC AAGCACTTGT TTCAAAGGGG ATCGCTGTGG TGCTTTTTAA CTTCCCTTAC ATGCAAACTA TTAGGTCAAC AGGTAAGCGC AGGCCCCCAG ATAAGGCAGA AAAGCTTATG GCCCACTTCG ATGCGCTGAT AGAGCATTGC AGTAAACGTA TTGAGGCGCT GCATAATATG CCTGTGTTCA TCGGGGGCAA ATCGATGGGC GGGCGAATGG CCACCATGGT GTATGAATCG GTAAGCAATG TGAAAGGGGC GATAGCATTA GGCTACCCAT TTCACCCCCC AGGCAAGCCT GACAAAACTC GAACGGAACA TTTATTAACT GCTACTAAAC CCCTTATTAT TATTCAAGGC GAACGAGATA CGTTTGGAAC AAAAGCTGAA GTAGAAAGTT ACGCATTGCC ATCAGAAATC CAATGCGCGT TTTTAGAAGA TGGCGATCAC AGTTTCAAGC CGCGAAAGGC CAGCGGCAAG ACGCAACAAG AACATATTGA AAAGGCGGCC ACACTTACGG CGGCGTTTAT TAACCAAGTA GTGAACACAT AA
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Protein sequence | MDNKAESHTF DIEVHHANNP VACLVLGHGA GAGKEHDFMQ DMAQALVSKG IAVVLFNFPY MQTIRSTGKR RPPDKAEKLM AHFDALIEHC SKRIEALHNM PVFIGGKSMG GRMATMVYES VSNVKGAIAL GYPFHPPGKP DKTRTEHLLT ATKPLIIIQG ERDTFGTKAE VESYALPSEI QCAFLEDGDH SFKPRKASGK TQQEHIEKAA TLTAAFINQV VNT
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