| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02547 |
|---|
| Symbol | |
|---|
| ID | 6777138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 2767428 |
|---|
| End bp | 2768681 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642755987 |
|---|
| Product | proton/glutamate symporter |
|---|
| Protein accession | YP_002126837 |
|---|
| Protein GI | 196157348 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCAAA GTAAATCTTT ACTGGCTAAT ATCGGCGTAC AAGTTGTTAT TGCCATGATC
ATCGGCACCG CCGTAGGTGC TTTTATGGGT CACAGCGCCG CTATGTTTGC CCCCTTAGGC
GCAATTTTTA TTAACCTCAT TAAGATGTTG GTTATCCCAC TGGTTGCGGT TGCGCTTATT
TCGGGCGCTG CGGGTTTAGG TAACAGTACC AACGCAGGTA AAGTGGGCTT TTCAACCCTT
GCCTATTTCG CGTTGACATC CGCGCTAGCC GTGGCGCTTG CGCTGATTAT GGGTGAAATT
TTCAAGCCTG GTGTGGGTAT CGATGTTTCA TCTGTAGAGG GAATGTTTTC TGGCGAGTAC
GCGTCGAAAG GCGAGCTGCC ATCGTTTTGG GCGACGGTGA CGGGCATGAT ACCTACTAAC
GTCTTTGCTT CTCTAACCAA TGCGAATATT CTTCAAATTC TAGTGTTTTG CCTGTTCTTT
GGCCTTGCCC TTTCTAAGCA GCCTAAAAAG AACCGCGAGC CTATTCTTCA GGGCGTAAAC
ACCATTGTAG ATGCGATGGT ATGGATGATT AACTGCGTTA TGAAAATTGC CCCTATCGGT
GTATTTGGCC TAATGGCCGA AGCGGTCGGC ACCTTTGGCT TTAGCGCACT TATGGTTGTC
TTCAAGCTTT TCTTAGTCTT TATCGCCGCT ATTCTCGTTT TTGGTTTTGT CATTTACCCA
CTGTTAGTAC AGCTGTTTAC CAAAACCTCT GCCAAGTCGT TCTTAGTGGC AATGAAAAAG
CCTCAAGCGG TGGCGCTTTC TACCGCGTCA TCTATGGCCA CCCTGCCCGT CACTATGAAT
ACGGTAGAAA ACGAACTGGG CGTAAGAAAT GCAACTGCGT CGTTTGTATT ACCTTTAGGG
GCCACGATAA ACATGAGCGG TAATGCTATT TACTATGGCT TAGTTGCCGT GTTTTTCGCT
CAGCTTTTTA ATATCGACTT ATCCATGGGG GCTTACGTTG CCATTATCCT TACTTCAACC
TTAGGCGCCG TGGGACAAGC TGGCGTACCA GGCCCGTCTT TTCTTGTGGT TGCGGTACTC
CTAGCCGCCG GCATTCCTAT TGAAGGCTTA CCACTTTTAT TCGCTCTCGA CCGTATTTTC
GACATGATTC GTACTGCGCT TAATATCACT GGCGACGCAG CGTGCGCAGT CATTATCGAT
AACATTGCTA TTGAAGCGTC TGACCTTACT GAAAGTGAGG TGAAGCAAAG CTAA
|
|---|
| Protein sequence | MSQSKSLLAN IGVQVVIAMI IGTAVGAFMG HSAAMFAPLG AIFINLIKML VIPLVAVALI
SGAAGLGNST NAGKVGFSTL AYFALTSALA VALALIMGEI FKPGVGIDVS SVEGMFSGEY
ASKGELPSFW ATVTGMIPTN VFASLTNANI LQILVFCLFF GLALSKQPKK NREPILQGVN
TIVDAMVWMI NCVMKIAPIG VFGLMAEAVG TFGFSALMVV FKLFLVFIAA ILVFGFVIYP
LLVQLFTKTS AKSFLVAMKK PQAVALSTAS SMATLPVTMN TVENELGVRN ATASFVLPLG
ATINMSGNAI YYGLVAVFFA QLFNIDLSMG AYVAIILTST LGAVGQAGVP GPSFLVVAVL
LAAGIPIEGL PLLFALDRIF DMIRTALNIT GDAACAVIID NIAIEASDLT ESEVKQS
|
|---|
| |