Gene MADE_02545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02545 
Symbol 
ID6777237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2766283 
End bp2766981 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content48% 
IMG OID642755985 
ProductD-alanyl-D-alanine carboxypeptidase 
Protein accessionYP_002126835 
Protein GI196157346 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1876] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.457217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACCG TTACAGAAAA AGCGTGGCTG GGCCAGCTTA ATGAAGATTT AGTTGATGCA 
GGTAACGGCC ACAGGCTTCA CATCGATGTG ATTTCCCCTT TTCTGGCTAT GCAAGATGCC
GCACACAAAG ACGGGATAGA CCTGCAGCTT GTCAGCAGCT ATCGCGACTT TGACCGGCAG
ACCGCTATTT TCAACCGCAA GTGGACAGGA AAGGCTCAAC TGCTTGATGT TAACGGTAGT
CTCTTGTCGT TTGATAGTTT ACGTGATGAC GAAAAGCTCC ACGCTATTCT TACATGGTCT
GCCTTACCCG GTGGGAGTCG TCATCACTGG GGTACCGACA TTGACGTGTA TGACAGGGCA
TCTGTTAAGC ATTGGGGTGG TCAATTCAAT CTTGTAGAAA CTGAATACGA GGCTGGCGGC
CCTTGTTACG CTCTAGCCTG CTGGCTTGGT GAAAATATGT CGCGTTTTGG TTTTTATCGG
CCGTTTTCAG TAAGCCGTGG TGGCGTGGCA GCAGAACCTT GGCACTTAAG CTTTAAAGAG
ACCGCCGATA CGTTTGAAAA AGCAAGAAAT TTACAAGGTT TAACCGCTGC TATTGAGCAA
AGCGACATAG AAGGTAAATC GTGTATTTTG TCGCAGCTGC CCACACTGTA TAGTCGGTAT
GTTTTAAACA ACGGCGTTTC GCCAACGGAA ACTGTATGA
 
Protein sequence
MTTVTEKAWL GQLNEDLVDA GNGHRLHIDV ISPFLAMQDA AHKDGIDLQL VSSYRDFDRQ 
TAIFNRKWTG KAQLLDVNGS LLSFDSLRDD EKLHAILTWS ALPGGSRHHW GTDIDVYDRA
SVKHWGGQFN LVETEYEAGG PCYALACWLG ENMSRFGFYR PFSVSRGGVA AEPWHLSFKE
TADTFEKARN LQGLTAAIEQ SDIEGKSCIL SQLPTLYSRY VLNNGVSPTE TV