| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02522 |
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| Symbol | |
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| ID | 6776783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 2738305 |
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| End bp | 2739588 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642755961 |
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| Product | putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator |
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| Protein accession | YP_002126812 |
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| Protein GI | 196157323 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTGAGA AAACTTTTCA CTATTGTGCG GTTGGGCTAG CTCATGTCGG CATAGACGGG
ACTTTCATTC GCGTAAACCA AAAGTTGTGT GACTTTTTGG ATTATTCAGA TCAGGAACTT
ACCAAGCTTA CCTTTCAGGA TCTTACCGCG CCGGACCACC TTGATGAAGA CCTCGATCAA
TTAGAGCGCT TGCTTAAAGG GCAAATCGAT AACTACTCAA TCGAAAAACG CTATATCAGG
CGTGATGGCA AGAGGGTATG GGCGAAACTT ACCGTTTCTC TTGTGCGGGA CGATAGTAAC
AACCCTGACT ATTTTATATC GGTTGTTGAA GATATTGATG AAAAAAAGCG TATTCAATCT
GAGCTTTTCC AAGTTGATGC CTTGTTTAGC AAAATTGTAA GTGCTTTCTC AGAAAGAACG
TTTATCTGGG TAGCAACGCC GGATTTCTCT AAACTCAAAT ACGCGAACGA TGGCTATGCA
AACATTTTCG GGCGAAGTGA ATACGAACTT TACTGTAACC CAATGAGCTT TCTTGATCAT
GTTCACGAAG ATGATAGAGC TAGAGTTGCC AAAGTCTTCA GTCGTCGCCC CCTTGAAAAT
TGGGATATTC AATATCGCAT TTACGATTCA AAAGGAGCGG TGAAGTATCT TCACGACCGC
GGAAACCTCA TCTTCGACGA CCGAGAAACA CAAACACTCA TCTTAGGCAC CGCCGACGAT
ATAACACGAG AAAAGAATCA GCAGCAGGCC CTAATGAGCG CAGTTACCAA GTTAGAGTAC
TTATCCCAAA CGGACTCCCT CACAGGCCTT GCTAATAGAA GAGAAATATT GAGTCAATTG
AGCGATGAAA TAGCGCGCAT GGAGCGAGGG CAAAAAGCGT CTACCCTCGT TTATGTTGAT
CTTAATAAGT TTAAAGAAAT CAACGATAAA TATGGGCATA AAGTCGGTGA TAACGCGTTG
GTAGAATTTT CTCAGCAAAT GAAAGTCTTG TTGAGGGATA GCGATCGATT TGGCCGAATT
GGCGGTGATG AGTTTGTTAT TCTGCTTTAT GGGACCGATG ATAAAGAAAC GGAAATCTTT
TTCGAGCGTA TTGCTCAGCA TGACTTTACG CTTAACGTGA ATAATACATC GGTAGTGCCG
ATTACCTTTA GCGTTGGGTG GGTAACATGG AGTGCTGAAA CTTCAACGGT TGAAGAGTGG
CTGGATAAGG CTGATGAGGT TATGTACGAA AAAAAGCACA ACCTGCAAGG GCAAGTAGTG
ATTGATAAAG CGATGAAGGT ATAG
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| Protein sequence | MFEKTFHYCA VGLAHVGIDG TFIRVNQKLC DFLDYSDQEL TKLTFQDLTA PDHLDEDLDQ
LERLLKGQID NYSIEKRYIR RDGKRVWAKL TVSLVRDDSN NPDYFISVVE DIDEKKRIQS
ELFQVDALFS KIVSAFSERT FIWVATPDFS KLKYANDGYA NIFGRSEYEL YCNPMSFLDH
VHEDDRARVA KVFSRRPLEN WDIQYRIYDS KGAVKYLHDR GNLIFDDRET QTLILGTADD
ITREKNQQQA LMSAVTKLEY LSQTDSLTGL ANRREILSQL SDEIARMERG QKASTLVYVD
LNKFKEINDK YGHKVGDNAL VEFSQQMKVL LRDSDRFGRI GGDEFVILLY GTDDKETEIF
FERIAQHDFT LNVNNTSVVP ITFSVGWVTW SAETSTVEEW LDKADEVMYE KKHNLQGQVV
IDKAMKV
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