Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02521 |
Symbol | |
ID | 6776625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 2737004 |
End bp | 2738284 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642755960 |
Product | predicted membrane protein |
Protein accession | YP_002126811 |
Protein GI | 196157322 |
COG category | [S] Function unknown |
COG ID | [COG3748] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.216294 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGTGGC TAGATTGGCT AAGTCTATTT GTACGTTGGT TTCACGTAAT AGCTGGCGTT GCTTGGATTG GTGCCTCATT TTATTTTATC TGGTTAGATA ATAATTTGCG CACGCCCCCA AAATGGAAGC AAGATAAGGG AATTAAAGGT GATTTGTGGG CCATTCATGG CGGCGGCTTT TATGAGGTGG CCAAGTATGC TTATGGGCCA GAAAAAATGC CAGAAACCCT GCACTGGTTT AAGTGGGAAG CTTATACAAC CTGGTTATCA GGTTTTGCCC TTCTTATCAT TGTATATTAC TTTGGCGCCA GCGCTTATCT TATCGACCCG TCGGTAAATG CTATAACGCC AACCTTGGCA ATCTCTTTAG GTTTGGGGTT AATTTTTGGC GGCCTAGCAT TGTATGAACT GGCCTGTAGA AGCCCACTTG CCAAGTACCC GTTGGTGTTT GGTATTTGCC TTGTTGCCTT AATATGCGCC GTGAGTTACC TCTCTACCCA ATGGTTCAGC GGCCGAGGGG CTTACATTCA TGTGGGTGCG CTTATCGGCA CTATTATGGC TGGAAACGTA TTTTTTAATA TCATGCCTAA CCAACGCAAA ATGGTGGCGG CAGTGGCTGA TAAACAAAAT ATTGACCCGA GTTGGGGCGC TGGTGCCAAA CTTCGCTCGC TGCACAACAA CTATTTCACC CTGCCCTTGT TGTTTATTAT GATTTCAAAT CATTACCCCA TGACCTATCA GCACCCGCAA AACTACTTGG TACTTATTGC TATCATGGTG GTTGCGGCAT GGATAAGACA CTTCTTTAAC CTTCGCCATG TGGGTACTAC GAAACCGAGC ATTTTGGTTT CTGGCGCCAT AGCCATGATG GCGATTGCAT TATGGGTGTC GTGGCCGCAA ACATCGTCGG CGCTTGTTCC TGTTCATACA GAGGTAGCTG TGCCTTCAAG TAAGACTACT CAAGTAGCGA ATAAAACCGA TGATGCTACC TCTATTGGTG AGAACAGTGC GGCGCAAGTG AGTACTAGTG TGACTAATGA ACGTGTAGCA AACTTGATAG CCACACATTG CGTGAGCTGT CACTCACGCA CACCTACCGA CGATATTTTC AAGGTAGCAC CGTTAGGCGT AGTGCTAGAC TCTTGGCAAG ATATTGAACG GTTTGCCCCT CAAGTGGTTC GTAGAACGAC AGTAACTAAA GACATGCCGT TTTTAAACAA AACGAACATG ACTGAAGAAG AGCGTCAAGA AATAGCCCAG TGGTTCGCGC AAAGACAATA A
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Protein sequence | MPWLDWLSLF VRWFHVIAGV AWIGASFYFI WLDNNLRTPP KWKQDKGIKG DLWAIHGGGF YEVAKYAYGP EKMPETLHWF KWEAYTTWLS GFALLIIVYY FGASAYLIDP SVNAITPTLA ISLGLGLIFG GLALYELACR SPLAKYPLVF GICLVALICA VSYLSTQWFS GRGAYIHVGA LIGTIMAGNV FFNIMPNQRK MVAAVADKQN IDPSWGAGAK LRSLHNNYFT LPLLFIMISN HYPMTYQHPQ NYLVLIAIMV VAAWIRHFFN LRHVGTTKPS ILVSGAIAMM AIALWVSWPQ TSSALVPVHT EVAVPSSKTT QVANKTDDAT SIGENSAAQV STSVTNERVA NLIATHCVSC HSRTPTDDIF KVAPLGVVLD SWQDIERFAP QVVRRTTVTK DMPFLNKTNM TEEERQEIAQ WFAQRQ
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