Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02512 |
Symbol | |
ID | 6778908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 2728113 |
End bp | 2728994 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642755951 |
Product | hypothetical protein |
Protein accession | YP_002126802 |
Protein GI | 196157313 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | [TIGR03212] putative urate catabolism protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGTTACG GTCAGCACGT ACCCCATGCC AAATGGCCAA ACAATGCCAA AATTGCCATA CAGTTTGTAT TGAATTACGA AGAGGGTGGT GAGAATTGTG TTCTTCACGG TGACGAAGCG TCCGAAATCT TTCTATCTGA AATTATAGGT GCACAAGCCT ATAAAGACCG CCATCTTAGC ATGGAGTCAA TCTACGAATA TGGCAGTCGA GCAGGGTTCT GGCGTTTACA CCGCTTACTG AATAAGCACG AAATCCCCGT TACCGTATTT GGCGTTACAA TGGCCATGCA AAGGCACCCT GAGGCGGTAA AAGCAATGAT TGATTCTGGT TGGGAAATTG CCAGCCATGC TATGCGATGG GTGCATTACC AAGATATGGA TGAAGAGCAA GAGCGCAAGC AAATTGATGA AGCGATTATT CTTCACGAGC AGCTAACCGG GGCTAAACCT GTAGGGTGGT ATACGGGAAG AACGAGCCCA AACACCTTAA AACTGATTGC CGAGCGAGAC GATATATTAT ATTGCGCTGA TTCCTACGCC GACGATTTGC CCTATTACGA TTGTCACTAC AGTAAGCCTC TACTCATGGT GCCCTATACG CTAGATACTA ACGACATGCG TTTTGCCACG CCGCAGGGGT TTAACAGCGG TGAGCAGTTC TTTACCTATT TAAAAGATGC ATTTGATGTA TTGTACGAAG AAGGTGAAGA AGCGCCTAAA ATGCTTTCTA TTGGCCTTCA CAATCGCATT ATTGGGCGGC CTGCTCGTAT GGCGGCGCTA CAGCGCTTTA TTGAGTACGT AAAGTCACAC GATAAGGTAT GGCTGGCTAC AAGAGAGCAA ATTGCCCGCC ATTGGCTTGA TACTCATCCT AAAGACGAGT GA
|
Protein sequence | MGYGQHVPHA KWPNNAKIAI QFVLNYEEGG ENCVLHGDEA SEIFLSEIIG AQAYKDRHLS MESIYEYGSR AGFWRLHRLL NKHEIPVTVF GVTMAMQRHP EAVKAMIDSG WEIASHAMRW VHYQDMDEEQ ERKQIDEAII LHEQLTGAKP VGWYTGRTSP NTLKLIAERD DILYCADSYA DDLPYYDCHY SKPLLMVPYT LDTNDMRFAT PQGFNSGEQF FTYLKDAFDV LYEEGEEAPK MLSIGLHNRI IGRPARMAAL QRFIEYVKSH DKVWLATREQ IARHWLDTHP KDE
|
| |