Gene MADE_02504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02504 
Symbol 
ID6776231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2720431 
End bp2722434 
Gene Length2004 bp 
Protein Length667 aa 
Translation table11 
GC content45% 
IMG OID642755943 
ProductSignal transduction histidine kinase 
Protein accessionYP_002126794 
Protein GI196157305 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTATT TTGACGAGCA GTCGAGTTTA AATATTAAGT TGGAAGCACA GCTAAAAACC 
TCGCTAACGG GGTTAGTTCA GCGCGGCTGT GATTCGCTTG GTATCTTCCA AGCTATGCTA
CTGCAAATTG ATGATGAAAC AGTCAACGTT CTTGTAAAAG CCTCCTCTGC TTATCCCCCA
AGCTTTAAGT CGATTCCCTC TTTTTCTTCA TGTGTTTCTG TAGATAACTG TTTTCCTGCT
AACAGCGCAA AAGCGTCGTC AGCCTTTAAG CAATGGTTTG CTGCATACTT TAATGGCGAA
AAGTACATTC GCGGGCGTAT TCACAATCTC GACGGAAATC GCGTTTGTCT GGTTTTCATT
AATGCCTGTC CGGCACAGTC GATAAACCTT GAAAAAGTGG CGTTACTCGA TGACTGGTTA
AATGTGATGA TTGAGAAGTT TCACGTTGAA AAAGCGGAAA CTAACCAGAA TACCCTGTAC
GATAAGCTAC AAAGCGTAGC AAATATTGGC ACGTGGGAAG TAGATTTCAC AACAAACGTT
CTAACTTGGT CATCACAAAC TCGTCGCATA CATGAAGTGG ATGACGATTT TATTCCTTCA
CTAGAAACCG CAGTGGGTTT TTACAAAGAG GGATTTGACC GAGGTGAGAT TAGCCGCATT
GTTTCTCATA CCGTCGAAAC GGGTGAACCA TGGAGTGCAA CCCTCGAACT AGTTTCTGCA
AAGGGTAACT CGGTGTGGAT CGAAACCCAT GGTATGGCAG AAATGAAGCA GGGTAAATGC
GTTCGGTTGT TCGGCACTTG TCAAAATGTG AATAAGTCGG TTCAGCTTAG GCTTGAGCTC
GACGCCCGTC GTAAAGAAGC GGAAGCGGCG TCTAAAGAGC GTGGCATGTT GCTTTCGCGA
ATTAGTCACG AGTTAAAAAC CCCGCTAAAT GGTATTACGG GAATGCTTCA GGCCATCAAG
TTTGAAAATA AAGACAATGT TCGCATAAGA AAAGCAGATA TTGCATTGCA CAGCGCCGAC
CGGCTTTTAT CGTTAATCAA CGATGTGCTT GACTATACGT CAATCATCAA TGGAGAATTT
TCCCTCAATT ACAGCGATTT TTGTGTACGC TCACTAGCCG AAGATATCGT TGATGAGTTT
AAAAATAAAT GTTCAGACAA AGGCGTCAGG CTTTATGCCG TATTGTCTTT TGACGATAAC
ACCTATGTTA ATGGTGATGC CGCAAGAATC AGTCAAGTTA TTACCAACTT GCTGTCAAAT
GCCGTCAAAT TTACGGCAAA AGGCTACATT TCTATTCAGG TCACCCTAAA GCAGCAGGGA
GATATACCTA TCTTGCTCGC CTCTGTCGAA GACACAGGTG TGGGCATGAG CGATGACATA
TTGTCGCGTA TATTCAGACC CTTCCAAAAC GATACCGACA GTGCATCAGA AGAATTAAAC
GGTAATGGTT TAGGCCTGTC TATCGTCAAC CAACTGGTAG GAAAAATGGG CGGCGAGTTA
GAAGTTCGCT CGAACGTGGG GAAGGGAACA TGTTTCGATG TAGCCATCCC TATTGAAATG
GCAACATTGG AAGAAACAGC GAACGAGGAT GTCGAGATAT CTTCTGAGCT TTTGACTGTG
CCGATAAATA TATTGGTCGT TGATGACAAC GACATAAACC GCCTTGTGCT GGCCTCCATG
CTTGAAAGAT TTAACTACGT GCCCGATGAG GCAGACAATG GCGAAGTTGC TGTCGAAATG
GCCCGGGCGA AAAGATATGA CCTTATTTTT ATGGACTGTG CGATGCCAGT GCTTGATGGG
ATGAGCGCAA CGAAAATCAT TATGCAAGAA GGGCTGCTAT CAAAATACGG AAGAGTTGTC
GCGGTAACCG CTAACACCAC AGCCGAAGAT AAAATTAGCT GTAGCGAAGC AGGAATGGCT
GATTTTCTGT CAAAACCCGT GGTCCAGAAC GACGTGACCG CGCAGGTTAG AACTGCATTG
AACGCAAAGT CTATCACCGC TTAA
 
Protein sequence
MVYFDEQSSL NIKLEAQLKT SLTGLVQRGC DSLGIFQAML LQIDDETVNV LVKASSAYPP 
SFKSIPSFSS CVSVDNCFPA NSAKASSAFK QWFAAYFNGE KYIRGRIHNL DGNRVCLVFI
NACPAQSINL EKVALLDDWL NVMIEKFHVE KAETNQNTLY DKLQSVANIG TWEVDFTTNV
LTWSSQTRRI HEVDDDFIPS LETAVGFYKE GFDRGEISRI VSHTVETGEP WSATLELVSA
KGNSVWIETH GMAEMKQGKC VRLFGTCQNV NKSVQLRLEL DARRKEAEAA SKERGMLLSR
ISHELKTPLN GITGMLQAIK FENKDNVRIR KADIALHSAD RLLSLINDVL DYTSIINGEF
SLNYSDFCVR SLAEDIVDEF KNKCSDKGVR LYAVLSFDDN TYVNGDAARI SQVITNLLSN
AVKFTAKGYI SIQVTLKQQG DIPILLASVE DTGVGMSDDI LSRIFRPFQN DTDSASEELN
GNGLGLSIVN QLVGKMGGEL EVRSNVGKGT CFDVAIPIEM ATLEETANED VEISSELLTV
PINILVVDDN DINRLVLASM LERFNYVPDE ADNGEVAVEM ARAKRYDLIF MDCAMPVLDG
MSATKIIMQE GLLSKYGRVV AVTANTTAED KISCSEAGMA DFLSKPVVQN DVTAQVRTAL
NAKSITA