| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02485 |
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| Symbol | |
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| ID | 6778716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 2699220 |
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| End bp | 2701136 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642755924 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_002126775 |
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| Protein GI | 196157286 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0163148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGTAA TTACCCTTCC TGATGGAAGC CAACGCGCTT TCGATAACCC TGTTTCTGTA
CTAGATGTTG CAAACGATAT TGGCCCTGGT TTAGCCAAAG CAACCATTGC GGGGAAAGTA
AACGGCGAAC TTGTAGACGC TGTTGACATG ATTGACGCAG ACGCACAACT TCAAATTATC
ACTGCAAAAG ACGAAGAAGG TTTAGAAATT CTTCGTCACA GTTGCGCGCA CTTGTTAGGC
CACGCTATCA AACAACTTTG GCCTAACACC AAAATGGCTA TCGGCCCAGT TATCGACAAC
GGTTTTTACT ATGACGTTGA TATGGAAGAG AGCCTAACCC AGGAAGATTT AGCTAAGTTA
GAAAAGCGCA TGCTTGAGCT GGCTAAAACC AATTACAACG TGGTTAAAAA TAAAGTTAGC
TGGCAGGAAG CCCGCGATGC ATTTGAAGCG CGCGGTGAAA GCTACAAAAT GGAAATTCTT
GATGAAAACA TCAGCAAGGA CGACCGCCCA GCACTTTATC AACACGAAGA ATACACCGAT
ATGTGTCGTG GCCCGCACGT ACCGAACATG AAGTTCTGCC ACCACTTCAA ACTCATGAAG
GTAGCAGGTG CTTACTGGCG TGGTGACAGC GACAACAAAA TGCTTCAGCG TATTTACGGC
ACAGCGTGGG CTGACAAGAA ACAGCTTAAG TCTTACCTAC AGCGCTTAGA AGAAGCGGAA
AAGCGCGACC ACCGCAAAAT TGGTAAAGCC CTTAACCTGT TCCATTGGCA AGAAGAAGCG
CCAGGTATGG TGTTTTGGCA CAACGACGGC TGGTCTATTT ACACCGAGCT AGAAAGCTTT
GTGCGTAAAA AGCTGCGTGA ATATGGCTAC GACGAAGTAA AAGGCCCATT AATGATGGAC
CGCTCTTTGT GGGAAAAATC AGGTCACTGG GATAAGTATG CTGAAAACAT GTTCACCACC
GAATCTGAAA AACGTGAATA TGCGGTTAAG CCTATGAACT GCCCGGGCCA CGTACAAATT
TTCAACCAAG GTTTGAAATC GTACCGCGAT TTACCGCTTC GTATGGCCGA GTTTGGCTGC
TGTCACCGTA ATGAGCCATC GGGTGCGCTA CACGGCTTAA TGCGTGTGCG AGGCTTTACG
CAAGACGACG CTCATATTTT TTGTACAGAA GAACAGATCC TAGAAGAGGT AAGTGGCTGT
ATTAAGATGG TGTATGAGAC ATACGCGGCA TTTGGTTTTG AAAATATCAA AGTTAAGCTG
TCTACTCGCC CTGAAAAGCG TGTAGGTGCT GACGAGATTT GGGATAAATC AGAAGCGGCG
CTTGCAGAGG CACTTAAAGC CAACGATATC GAATTCGATT ATCAGCCTGG TGAAGGCGCG
TTCTACGGCC CTAAAATTGA ATTTACGCTG CACGACTGCT TAGACCGTGC GTGGCAGTGT
GGAACGGTAC AGCTTGATTT CTCAATGCCT GGTCGTTTGG GTTCAACCTA TGTGGCTGAA
GATGGCGAAC GTAAAGTACC GGTAATGATT CACCGTGCTA TTTTGGGTTC ACTAGAGCGC
TTCATTGGTA TTTTGACCGA AGAATTTGCA GGTTTCTTCC CACTTTGGTT GGCACCTCAG
CAAGTTGTGG TAATGAATAT TACCGATAAA CAGGCTGACT ATGCATCAGA TTGTGTAAAA
AAACTGCAAG ATTTAGGGTT TAGAGCAAAG TCTGACTTGC GTAATGAGAA AATCGGCTTT
AAAATCCGCG AGCACACATT GAAGCGTATT CCGTATATGC TGGTTGTGGG CGATAAAGAA
ATGGAAGCGG GCGAAGTAGC AGTACGCTCT CGTCGCGGCG ATGACCTAGG CAAAATGGGC
CTGGAAGACT TTATTGCCAT GGCTCAACAA GAAGTTGTAG AAAAGACAAT TAAATAG
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| Protein sequence | MPVITLPDGS QRAFDNPVSV LDVANDIGPG LAKATIAGKV NGELVDAVDM IDADAQLQII
TAKDEEGLEI LRHSCAHLLG HAIKQLWPNT KMAIGPVIDN GFYYDVDMEE SLTQEDLAKL
EKRMLELAKT NYNVVKNKVS WQEARDAFEA RGESYKMEIL DENISKDDRP ALYQHEEYTD
MCRGPHVPNM KFCHHFKLMK VAGAYWRGDS DNKMLQRIYG TAWADKKQLK SYLQRLEEAE
KRDHRKIGKA LNLFHWQEEA PGMVFWHNDG WSIYTELESF VRKKLREYGY DEVKGPLMMD
RSLWEKSGHW DKYAENMFTT ESEKREYAVK PMNCPGHVQI FNQGLKSYRD LPLRMAEFGC
CHRNEPSGAL HGLMRVRGFT QDDAHIFCTE EQILEEVSGC IKMVYETYAA FGFENIKVKL
STRPEKRVGA DEIWDKSEAA LAEALKANDI EFDYQPGEGA FYGPKIEFTL HDCLDRAWQC
GTVQLDFSMP GRLGSTYVAE DGERKVPVMI HRAILGSLER FIGILTEEFA GFFPLWLAPQ
QVVVMNITDK QADYASDCVK KLQDLGFRAK SDLRNEKIGF KIREHTLKRI PYMLVVGDKE
MEAGEVAVRS RRGDDLGKMG LEDFIAMAQQ EVVEKTIK
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