Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02463 |
Symbol | |
ID | 6778543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 2674409 |
End bp | 2675668 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642755902 |
Product | putative glycosyl transferase in colanic acid gene cluster |
Protein accession | YP_002126753 |
Protein GI | 196157264 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00021101 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACATCT TGTTCATGCC AGATTTTAAG GAATTTAATT TGAAAAAAGT GATATTTTTT GTAAAAAGGT TTCCGGTGTT ATCACAAACC TTTGTTATAG ATCAAATCAA CGGACTTATT GATCAAGGCG TTGATGTGAA AATTTTGGCT TTCTATGAAG AAAAACAGGA TATAGCTTTA AAATCTCTAG AAAAGCATAA CTTGTTAAAG CGCACTGAAT TTATATCCCC AGCCAATACT CGCAAGGTAA AAAGGCCGTT CAAACTACTT TTCTTACAAC TGTTTGATTT GTTTGTTCAG TACAAATATA CGTCGCTGAA ACCTGTTGCC GACTTTGCGA GATATGCCAA GTCAAACGGT AAAGTAGTTT TGGCATACGA AGTAGCAATG ACAATGTGGG TTAACCGTAA TAAAACATTC GAAGCAGATA GTATAATCGC GCACTTTGGC AACAATGGCG TAGTTGCACA AAAACTCATA TCCTCGGGAA TGCTGAAGGG AAGCCTGAAC ACCATTTTTC ACGGCTATGA AATAAGCGAG TATGAAAACG TCTCTTTCTG GAAAACAAAA TACGTTGAAT TATCGCGCTC TAGCAGGTTG CTTCCGATTA GTTATTTCTG GAAGAATCGA CTTGAAAGTT GGGGCGCAAA TAGTGATGCA ATTAGGGTGC TACGTATGGG CGTAGATATC AACACCTTCG ATTTCAAGAA TAAAGCTATG AGCGAAAATG TAAGAATAGT TAGCGTAGCT CGTGCGACTG AAAAAAAGGG TTTAAAATAT GCTATAAAAG CGATGGCTCA TTTGGATGAT CGCTTTCACT TAACTCTAGT AGGCGGTGGT GAACTAGAGT CAAACTTAAA AAGTTTAGCG GTTGAGTTAG GTGTTAATGA AAAAATAACC TTTTACGGTC CACAACCACC TGATTTTGTA AAAAAAATAT TAGACGCCTC AGATATATTC CTATTACCTT CAATAACAGA CAGCGTTGGC GATATGGAAG GTGTTCCAGT GGCTCTAATG GAAGCAATGG CTAGTGGGCT AACCGTAATA AGTACTATAC ATAGTGGTAT CCCCGAACTA ATAACTGATG GGCAATCCGG CTTTCTAGTG CCTGAAAAGG ACGCTATCAG TATAGCAAAT GCGGTAAAAA GAGCAGCATT GTCGGATGAA ATTCACACTA TCAAAGACAA TGCTAGAAAA AAAGTCGTGT CAGACTTCAA TTCGACAAAG TTATCTAAAG AGCTATATAC ACTTTTATAA
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Protein sequence | MDILFMPDFK EFNLKKVIFF VKRFPVLSQT FVIDQINGLI DQGVDVKILA FYEEKQDIAL KSLEKHNLLK RTEFISPANT RKVKRPFKLL FLQLFDLFVQ YKYTSLKPVA DFARYAKSNG KVVLAYEVAM TMWVNRNKTF EADSIIAHFG NNGVVAQKLI SSGMLKGSLN TIFHGYEISE YENVSFWKTK YVELSRSSRL LPISYFWKNR LESWGANSDA IRVLRMGVDI NTFDFKNKAM SENVRIVSVA RATEKKGLKY AIKAMAHLDD RFHLTLVGGG ELESNLKSLA VELGVNEKIT FYGPQPPDFV KKILDASDIF LLPSITDSVG DMEGVPVALM EAMASGLTVI STIHSGIPEL ITDGQSGFLV PEKDAISIAN AVKRAALSDE IHTIKDNARK KVVSDFNSTK LSKELYTLL
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