| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02456 |
|---|
| Symbol | |
|---|
| ID | 6777107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 2665964 |
|---|
| End bp | 2667457 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642755895 |
|---|
| Product | putative orphan protein; putative transposase |
|---|
| Protein accession | YP_002126746 |
|---|
| Protein GI | 196157257 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.604942 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGGAA ATCACATCAC AGAAAAACAA GTCAGGTTAT ATATGAAGTT CAGAAAGGAT
TTCACGCAGG AAGTGGCCGC CAGTAAAGCG GATATCTCTG TTAGCTCCGC CAGACGAATC
GAGAATGGTC GTCACCAACC TAATCAAGCA AAACGCCAAT GGCGTACCAG ACCCGATCCT
CTTGAAGCGG TGTGGGAGAG TGTCGTTGTT CCCATCTTAC AACAAGATGA ATTGATTACG
CCGGTAGGCG TATTTGATCA TCTATGTGAA TCACATAGTG ACGACTTCCC AACTACAGCA
CGACGTACGC TTGAGCGCAG AATTAAGAAG TGGCGACAAT TACACGGTGG CGCTAAAGAT
GTGATGTTCT TGCAGCATCA CGAATCAGGA CTACTGGGAA TATGTGACTT TACCCACGTC
AAATCTCCTA TCACCATAGG ACGAGAGCCG TGTAAGCACA TGCTGTTTAA CTATCGCCTA
GCGGCCAGCG GCTGGCAGTA TTGCCAAGTA GTTTATGGCG GTGAGAGCTT TGCTGCATTC
TCCGATAGCC TTCAGAAAGC GTTTAGAGAA AGTGGTGGCG TGCCCAAAGA AGTCCGCACT
GACAGCTTAA GTGCGGCGTA CCGAAACCAT GACAATGCCG AGGCATTTAC CGAACGCTAT
AAGTCGTTGA TGGCGCATTA CGGTTTTACG GCCACACGTA ATAATACCGG TGTAGCGCAT
GAAAATGGTG TTATCGAGTC TAGCAATCGA CATGTCAAAG CGCAGTTAGA ACAAGCGCTG
CGTATACGCG GCTCGTTCGA TTTTAACTGT CGCGATGACT ATGAAGGCTT TATTCAGCAG
TTAGTTGGGC GGCGTAACAA GCGTATCAAC ACCGCCTTTA TCAAAGAGCA GCGACAATTA
CAGCCATTGC CGCCTGTAGG TAGCGTCAAT TACTCAATAG AATATGTGCG CGTCTCGCGC
ACCAGCACTA TCAATGTTAA ACGCGTGACC TACACAGTGC CTTCCCGCCT GATAGGCAGT
CGCTTGCGGG TACAAGTGTA TGATAACAGG TTAGCCTTAT ATCTCGGTCA TGAACTGACT
TACACCCTAG AGCGCGTTTA TGCGCAAGGC AGTTCGCGTA AACGCAGCGT CAATTACAAA
CACGTCATAG ATGCTCTGGT TAAAAAGCCA CAAGCCTTCC GGTGTTCACA GTGGCGCGAC
GAGCTATTAC CTAACGAGGA TTACCGATGC ATCTGGCAAT ATGTTAACGG CAATATGAAA
GCAGATGATG CCTGTCGTTA TATCGTCAGA GTGCTTCACC TTGCCAGCAA AAAAGATAAC
GAAATACGGC TGGGGCGCTT TATCATGCAG CAACTGAATA CGGGGAGACT GCCCAGCCTG
TTTGACTGCC AAGAGCGCTT CCAGCAACAA ACACGTGATA TACCCCAACT CCAAGTGGGG
CAGCATTCGT TAAAACAGTA TGGCCTACTG TTGCAAGGAG GTCGAAATGA CTAA
|
|---|
| Protein sequence | MSGNHITEKQ VRLYMKFRKD FTQEVAASKA DISVSSARRI ENGRHQPNQA KRQWRTRPDP
LEAVWESVVV PILQQDELIT PVGVFDHLCE SHSDDFPTTA RRTLERRIKK WRQLHGGAKD
VMFLQHHESG LLGICDFTHV KSPITIGREP CKHMLFNYRL AASGWQYCQV VYGGESFAAF
SDSLQKAFRE SGGVPKEVRT DSLSAAYRNH DNAEAFTERY KSLMAHYGFT ATRNNTGVAH
ENGVIESSNR HVKAQLEQAL RIRGSFDFNC RDDYEGFIQQ LVGRRNKRIN TAFIKEQRQL
QPLPPVGSVN YSIEYVRVSR TSTINVKRVT YTVPSRLIGS RLRVQVYDNR LALYLGHELT
YTLERVYAQG SSRKRSVNYK HVIDALVKKP QAFRCSQWRD ELLPNEDYRC IWQYVNGNMK
ADDACRYIVR VLHLASKKDN EIRLGRFIMQ QLNTGRLPSL FDCQERFQQQ TRDIPQLQVG
QHSLKQYGLL LQGGRND
|
|---|
| |