| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02433 |
|---|
| Symbol | |
|---|
| ID | 6777314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 2635812 |
|---|
| End bp | 2637260 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 642755872 |
|---|
| Product | sensor histide kinase |
|---|
| Protein accession | YP_002126723 |
|---|
| Protein GI | 196157234 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAG ATTATGAAAA CGTTTTAGAA GAGCTTGCGC TTGTCTATCG GCTGAAACAA
CAAGCTGAAG CGCACAAAAA AGAAAGCGAC GCTTTGTTAG AAGGAACACA GGCGCTGCTA
ACCGCCGAAG ATAAACAAGA CTTGTACCAT AAAATGTTCA GTGTCTTTAA AGGGCTGTAC
AATTACGAAG TATGTTTTGT GCTACAAAAC GAAGGGCCAA AGCGTATGAC TTGCATTAAC
AGTACCTACG CGCCACTTCT TAATACCGTT TGGGAAATTG ACGAAACCTT ATCCCGTGCG
GTCAAAAGTA CGCCCGTGGC CCTATTTGAT ATCAGGCAAC AACCTATTTG GCAACAACAT
CTCTCGCTAT TTGATACTCA AGTCACCTCT GTACTTTACT GCCCGTTTAA CGTACACCAG
CAGCAAGCCG TTATCGTGTT TTGCCATCAG TCGCTAGGCT ATTACACGCA AGAGTATGTA
GACATGGCCA ACCGCTACCG CACGTTTACC GAACAAATTG CAATGGGTAT GCACGCTAAA
TTAATGGCTC TTGAAACAGT AAGGCTGAAA GAGGAGAAAG CACAAGTAGA GAAAAGCCTT
ATCGACTCAG AAAAAATGGC GTCGCTAGGC TTGCTTGCGG CAGGTGTGGC ACACGAAATC
AATAACCCCA TAGCCTTTAT CAATAGTAAC ATCCATTTTC TGCGAAATGT GTTGCCAGCT
TTATCTCAAA TGCAAAATAT TGTGGTTAAA CTGTCACAAA GCCAAAGTGA TGAAGAACGC
GCCCAACTAA CTGCAGAAGC CATAGCTTGG CAAACACAGA ACAGAATCGA TTCATTGAGC
GACGAAATTG CAGATATTTG TAGTGAGTCT GAAGACGGGC TTGTTCGAGT CACTGATATT
ATCACCAGCC TGCGCTCGTT TTCCCATGAC GCGGATGTTC AGGACGATGA GACGATAAAC
GTTAATGACT GCATTGGTCA CGCTCTTAGG CTGGTAAATA GTGAACTAAA GCACAGAATA
AAAATTCAGC AGAAACTAGA CAGTGTGCTT CCTGTTAAGG GGAGAACAGG CAAACTAAAC
CAAGTGTTGG TTAACCTATT CGTAAATGCA GCACAAGCCA TGAACGATGG CGGCACGCTC
ACAATCACTT CATACAATGA TACGGAAAAC CACAATACAG TTATGGTTAT TAAAGACACG
GGTTGCGGAA TAGAAAAACA TGCCTTACAA AAATTGTTTG AACCTTTTTA CACTACAAAG
CCCACCGGCA AAGGTACAGG TTTAGGGCTT TATATCTCAT TTTCTATTGT TGAAGCCATG
GGTGGCACCA TTTCGGTAGA AAGCGAAGTA AATGTGGGTA CGACTTTTAC CCTCGCCTTC
CCAACGAAAT TAGCGCATAA AAAAACCGCA CAACAGTGCG GTTTCAATAC GTCTGGTGAT
GATACCTAA
|
|---|
| Protein sequence | MNKDYENVLE ELALVYRLKQ QAEAHKKESD ALLEGTQALL TAEDKQDLYH KMFSVFKGLY
NYEVCFVLQN EGPKRMTCIN STYAPLLNTV WEIDETLSRA VKSTPVALFD IRQQPIWQQH
LSLFDTQVTS VLYCPFNVHQ QQAVIVFCHQ SLGYYTQEYV DMANRYRTFT EQIAMGMHAK
LMALETVRLK EEKAQVEKSL IDSEKMASLG LLAAGVAHEI NNPIAFINSN IHFLRNVLPA
LSQMQNIVVK LSQSQSDEER AQLTAEAIAW QTQNRIDSLS DEIADICSES EDGLVRVTDI
ITSLRSFSHD ADVQDDETIN VNDCIGHALR LVNSELKHRI KIQQKLDSVL PVKGRTGKLN
QVLVNLFVNA AQAMNDGGTL TITSYNDTEN HNTVMVIKDT GCGIEKHALQ KLFEPFYTTK
PTGKGTGLGL YISFSIVEAM GGTISVESEV NVGTTFTLAF PTKLAHKKTA QQCGFNTSGD
DT
|
|---|
| |