| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02394 |
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| Symbol | |
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| ID | 6777959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 2583781 |
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| End bp | 2587737 |
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| Gene Length | 3957 bp |
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| Protein Length | 1318 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642755833 |
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| Product | helicase, ATP-dependent |
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| Protein accession | YP_002126684 |
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| Protein GI | 196157195 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGCGCC GCATTACGCT GCTTGCACAA AAAGCAAAGG GGTTAGGTGA GTCTAAAGGC
GCGGCACCGG GTGACAAAAG CGAGGCTTCA AAACGCAAAG CGCTCGGGGG TAGTACGTCG
CATAGCGCAA ATAAAGGAAG TCAGAAAAAC GCACAAAAAT CGGCCGAAGA AAGTTTAAGC
ACGCAGTTTG AAAAACTTAA AGCAGACATC AATGGGTCAA TTGAAAAGCG CAACTGGCGT
AAAGCCAACC TACCAAAGGT AGAGTATCCA CCGCTACCGG TAAGCGATAA AAAAGAAGAT
ATTAAAGACG CCATAGCCAA CAATCAGGTT GTGATTGTTG CGGGTGAAAC TGGCTCGGGT
AAAACCACTC AGCTGCCTAA AATATGCTTA GAACTAGGTT TAGGTGTGAA TGGCATGATT
GCCCATACGC AGCCGCGTCG TCTTGCTGCT AGAAGTGTGG CTACCCGTAT TGCAGAAGAG
CTTAATACGC CATTGGGCGA AAAAGTGGGC TTTAAAATTC GCTTTAGCGA TCAGGTGAGT
GAACGCAGTT ATGTAAAGCT AATGACAGAC GGTATGCTGC TCGCGGAAAT GCAGCAAGAC
CGTTTTTTAA ATCAATACGA TACAATTATT ATCGATGAAG CCCACGAACG AAGCTTAAAT
ATCGACTTTT TGCTCGGCTA TCTTAGACAG CTGTTACATA AGCGCCCTGA TCTCAAGCTT
ATCATCACCT CAGCGACCAT CGACCCAGAG CGGTTCTCTA AGCATTTTAA TAACGCACCT
ATTATTGAAG TAAGTGGCCG GACTTATCCA GTTGAGGTTC GCTATCACGC CCCTGAAGAC
TTTGATGAAG ATCGCGATCA AAGCGATGCT ATTATTCATG CCGTTGACGA GCTTATGCGT
GAAGCGCCAG GCGATATCTT AGTATTTTTA AGTGGCGAAC GTGAAATAAG AGACACCCAA
GATGCGCTCA GTAAGCAGCA TTATCGCAAT ACTGAAATCG TGCCTCTTTA TGCGCGGCTA
TCCGCCGCCG AGCAAAACCG CATTTTTCAG TCCCATAGCG GCAGGCGCAT TGTGCTTGCT
ACGAACGTGG CTGAAACGTC GTTAACGGTG CCTGGTATTA AGTATGTTAT CGACCCTGGT
TTCGCCCGTA TTTCGCGATA CAGTGCAAGA AGTAAAGTGC AGCGGCTGCC GATAGAGCCT
ATTTCGCAGG CCTCTGCGAA TCAGCGGGCA GGGCGATGCG GCCGTGTTTC AGACGGTATT
TGTATTCGCT TGTACAGCGA AGATGACTAC CTTGGTCGTC CGGAGTTTAC TGACCCTGAA
ATTCTGCGTA CGAATTTAGC ATCAGTCATT TTGCAAATGT TAGCGTTGGG GCTAGGCGAT
ATTGCTGCGT TTCCATTTGT TCAGCCACCC GACAACCGCA ATATTAACGA TGGTTTTCGC
TTGCTTGAGG AAATTCAGGC AATTGGTAAA GGGAAAGGTA AACAAAAAGG GAAAATGCAG
CTTACGCCAC TTGGCAGACA GATAGCTAGG CTGCCCATTG ACCCGCGTTA TGCACGCATG
GTGATTGAAG CTGAGCGAAC GAATGCGCTT AGTGAAGTCA TGGTTATTGC TGCGGGCTTG
TCGATTCAAG ACCCGCGAGA GCGCCCTCAG GAAAAGCGCC AGCAAGCTGA CGAAAAGCAC
AGTGAATATC AAGATAAAGA CTCTGACTTT ATTAGCCTTT ACAACGTGTG GGTAGCGTTT
AGAGAGCAGC AAAATGCGTC AAGCCAAAAC CAGCTGCGCA AATGGTGTAA GCAGCAGTTT
ATCAACTACC TACGTATGCG CGAATGGCAA GACATTGTTA GCCAGCTTAA AAAGTCGATT
GCCGAGCTTG GCTTTGGTAT TTCAAAGCAA GAAGCGGATT ATCAATCTAT TCACCAAGCT
ATCGCCAGCG GCCTGCTTTC ACATATGGGC TTTAAAGATA AAGAGCGCGA GTATATGGGG
TCGCGTAACT CTCGCTTTTT AATCTTTCCA GGGTCAGGTT TGTCGAAGTC GCAGCCAAAG
TGGGTCATGG CGGCAGAGCT GGTGGAAACC TCTAAATTGT TTGCGCGCAT GGTGGCAAAA
ATTGACCCTA CCTGGGTAGA GCCTTTAGCC GAGCACGTGG TACAGCGAAG CTACTCAGAG
CCTCACTGGT CTAAAAAGCG CGGTGCGGTT ATCGCCTTTG AAAAAGTTAC GCTGTTTGGT
CTGCCGATAG TCATGAAGCG GGCCAAGGTG TACAGCCTAA TCGACCCACC AATTTGCCAC
GAGTTGTTTA TTCGTGAAGC CCTGGTTGAA GGTAATACTA AGCTAAACTA CAGCTTCCTT
GAGGAGAATC AGGCGCTACT AGAGCAAGCG GATGAATTTG AGCAAAAGAC CCGTCGTCGC
GATTTGATTG TGGATGACGA AGAGCTTGTG AGCTTTTACG CCAAACGTAT CCCACTTGAG
GCAAACAACG ATGCGGCTTT TAAGAAGTGG TTCAGACAGC ACGGCAGCAA CGACAGCCTA
ACGTTTAAGG AAGAGGATGT TTATCGTCAG CAGCCAGGTC AGTCAGTGGC CAATGCATTT
CCCGACGTAT GGCGACAGGG CAATATTACA CTGCCGCTGC GCTATAATTT TGAGCCAAAC
GCTGTCGATG ACGGGGTGAC TGTAGTGATC CCGCTACCCG TATTAAACCA GGTCGATAAC
ATTGGTTTCG ATTGGTTAGT ACCGGGGTTA AGACACGACT TAATTGTAGG GTTAATCAAG
GCCCTGCCCA AACGCTTGCG CCGTAACTTT GTACCAGCTC CTAATTTCGC CGAGGCCTGT
CTAGCTGATA TCAGTGAAAC GGACAAAAAC AACCGGCCTG TGCCCTTGCT TGAAGCCGTA
ACCGATAAGC TTCGCAAAAT GACAGGCGTC ATTATTGAAA GCGATGAGTG GAACCTAGCC
CAGCTTGATA AGCATTTAAA AATGCATTTC GCAGTGGTGA ACGACAACGG GGACGATATT
GCAAAGGGTG ACGACCTACA CGCCCTTAAA CAGCAGTGTG CAGGGCAGGT AAAACAAACC
TTTGAAAAAG CGGCAACGCC CGAGTTAGAA CGCAGCAACA TAGAGCAGTG GGACTTTGAA
AGCTTGCCCG AAACTTTTGT GCAGAAGGTG GGCGGGTTTG AAGTACAAGC ATTCCCTGCG
TTGGTTGAAA AGGGCGATAA AGTTGATATT GCGCTTATAG AGGAAGCGGA TAAAGCGCAA
GCCTTACACA AACAAGGCGT GAATGTATTA ATTAAAAATG CCATGCCATC GCCGCTTAAT
TACTTACAGA GTAAACTGCC CAATAAAGCA AAACTAGGCC TTTATTTTAA CCCGTTTGGC
CAAGTTAAAG CGTTAATTGA CGATTGTATT TTTGCGGGTA TCGATGCCAT TGTGACAGAC
TACTGCGAAG CGAATAAAAC CGATATTCGC AACAAGGCCG ACTTCGAAGC CTGTCTAGAT
ATTGCCCGGG CAAGCATTAA CGATAAGGTG CTTGAAATTG CTAAACAAGT AGAGCAGGGG
CTCACGCTTG CTCATCAATG CCAAAAGCAA ATGAAAGGCA ATGTGCCATT AACCATGATC
AATGCGCTAG GCGACTGTAA AGCGCATCTG GCGCAATTAG TATTTCCAGG CTTTGTCTCA
CAAATAGGTG AAGCAAGACT TGATGATTGG AATCGTTACA TCAAAGGGTT GGCAAGACGA
CTAGAAAAAC TACCCATTGA TCCTAACAAA GACAGAATGC ATCAGGTAAC GGTGGAAAAA
TCGACGAAAG AATGGGAAAA AACCTGTAGT AAATACCCTA AGGGTAAAGT GCCGCAAGCG
CTATTAGACG TACGTTGGAT GATAGAAGAA CTGCGTGTTT CACTGTTTGC ACAGCAACTG
GGTACGGCGT ATCCCATATC AGCGAAACGC ATCACACTGC ATTTAGCAGA GTATTAG
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| Protein sequence | MKRRITLLAQ KAKGLGESKG AAPGDKSEAS KRKALGGSTS HSANKGSQKN AQKSAEESLS
TQFEKLKADI NGSIEKRNWR KANLPKVEYP PLPVSDKKED IKDAIANNQV VIVAGETGSG
KTTQLPKICL ELGLGVNGMI AHTQPRRLAA RSVATRIAEE LNTPLGEKVG FKIRFSDQVS
ERSYVKLMTD GMLLAEMQQD RFLNQYDTII IDEAHERSLN IDFLLGYLRQ LLHKRPDLKL
IITSATIDPE RFSKHFNNAP IIEVSGRTYP VEVRYHAPED FDEDRDQSDA IIHAVDELMR
EAPGDILVFL SGEREIRDTQ DALSKQHYRN TEIVPLYARL SAAEQNRIFQ SHSGRRIVLA
TNVAETSLTV PGIKYVIDPG FARISRYSAR SKVQRLPIEP ISQASANQRA GRCGRVSDGI
CIRLYSEDDY LGRPEFTDPE ILRTNLASVI LQMLALGLGD IAAFPFVQPP DNRNINDGFR
LLEEIQAIGK GKGKQKGKMQ LTPLGRQIAR LPIDPRYARM VIEAERTNAL SEVMVIAAGL
SIQDPRERPQ EKRQQADEKH SEYQDKDSDF ISLYNVWVAF REQQNASSQN QLRKWCKQQF
INYLRMREWQ DIVSQLKKSI AELGFGISKQ EADYQSIHQA IASGLLSHMG FKDKEREYMG
SRNSRFLIFP GSGLSKSQPK WVMAAELVET SKLFARMVAK IDPTWVEPLA EHVVQRSYSE
PHWSKKRGAV IAFEKVTLFG LPIVMKRAKV YSLIDPPICH ELFIREALVE GNTKLNYSFL
EENQALLEQA DEFEQKTRRR DLIVDDEELV SFYAKRIPLE ANNDAAFKKW FRQHGSNDSL
TFKEEDVYRQ QPGQSVANAF PDVWRQGNIT LPLRYNFEPN AVDDGVTVVI PLPVLNQVDN
IGFDWLVPGL RHDLIVGLIK ALPKRLRRNF VPAPNFAEAC LADISETDKN NRPVPLLEAV
TDKLRKMTGV IIESDEWNLA QLDKHLKMHF AVVNDNGDDI AKGDDLHALK QQCAGQVKQT
FEKAATPELE RSNIEQWDFE SLPETFVQKV GGFEVQAFPA LVEKGDKVDI ALIEEADKAQ
ALHKQGVNVL IKNAMPSPLN YLQSKLPNKA KLGLYFNPFG QVKALIDDCI FAGIDAIVTD
YCEANKTDIR NKADFEACLD IARASINDKV LEIAKQVEQG LTLAHQCQKQ MKGNVPLTMI
NALGDCKAHL AQLVFPGFVS QIGEARLDDW NRYIKGLARR LEKLPIDPNK DRMHQVTVEK
STKEWEKTCS KYPKGKVPQA LLDVRWMIEE LRVSLFAQQL GTAYPISAKR ITLHLAEY
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