| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02382 |
|---|
| Symbol | |
|---|
| ID | 6777850 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 2568516 |
|---|
| End bp | 2570888 |
|---|
| Gene Length | 2373 bp |
|---|
| Protein Length | 790 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642755821 |
|---|
| Product | phosphoenolpyruvate synthase |
|---|
| Protein accession | YP_002126672 |
|---|
| Protein GI | 196157183 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.223417 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAAT ACGTACTTTG GTATCAAGAA CTGGGCATGC ATGATGTGGG TCGCGTAGGC
GGCAAAAATG CATCATTAGG CGAGATGATT TCAAACCTGG CTAACGCCGG TGTGCAGGTG
CCGGGTGGTT TTGCTACCAC CGCCGAAGCA TTTAACGAAT TTCTAGAGCA AAGTGGCCTA
GAAGCTAGGA TCCATGAAGT TTTAGATTCA TTAGACGTAG ATGACGTGAA TGCCCTTGCT
GAAGCGGGCA AGAATATTCG TCAGTGGATT ATCGACACGC CATTTCAAGG CAAGTTAGAA
GAAGAAATCA AAACGGCATT TGTTACCCTC CAAGGGGATG CGGGTGAAGA GGCGTCATTC
GCGGTGCGCT CTTCAGCCAC GGCAGAAGAT ATGCCTGATG CGTCATTTGC CGGTCAGCAA
GAAACTTTCC TAAATGTTAA AGGTTACGAG TCGGTTCTTG TGGCGATTAA ACACGTGTTT
GCGTCACTGT TTAACGACCG AGCGATTTCT TATCGCGTAC ACCAAGGTTA CGACCACAAA
GGTGTGGCGC TGTCTGCGGG TATTCAGCGC ATGGTGCGCA GTGATATCGC TTCATCAGGC
GTTATGTTTA CTATCGATAC AGAGTCTGGT TTTGAAGACG TTGTATTTAT TACCAGTTCA
TTCGGTTTAG GTGAAATGGT GGTGCAGGGC GCAGTAAACC CTGATGAGTT CTACGTGCAC
AAACCTACGT TAGACAAAGG GCTTCCCGCC ATCGTACGTC GTAACCTAGG TAGCAAGCTT
ACCAAGATGA TTTACTCAGA CGACGAAGCA CACGGCAAAC AAGTGTCCAT CGTTGATATT
GATGCTGCTG ATAGCAAAAC GTTCTCGCTT AACGACGATG AAGTGATGGA ACTAGCAAAG
CAAGCGCAAA TCATTGAAAA GCATTACCAA CGCCCTATGG ATATCGAATG GGCGAAAGAC
GGCGTAGACG GTAAGCTTTA TATCGTTCAG GCACGCCCAG AAACCGTGCG CAGCCGAGAA
GACTCACAAA GCATTGAGCG CTTCCAACTA AAAGGCCAAA GCAATATCGT TGTTGAAGGC
CGCGCAATTG GTCATAAAAT TGGTGCTGGT GTAGCTAAAG TGCTCGACTC AATTGAAGAG
ATGGACAAAA TTCAAGCCGG CGACGTACTG GTGACTGACA TGACAGACCC TGATTGGGAA
CCTATCATGA AGAAGGCGTC TGCCATTGTT ACCAATCGTG GTGGACGTAC CTGTCACGCG
GCTATTATTG CTCGCGAGCT TGGTATTCCT GCGGTAGTCG GTTGCGGTAA CGCTACTGAC
AGTATAAAAA ACGGTGACAA GATTACCGTT TCTTGTGCAG AGGGCGATAC GGGTTATATT
TACGGTGACG AGCTTGAGTT TGACGTAGTC ACTTCGCGTA TAGACGCTAT GCCAGATTTA
CCGTTAAAGG TAATGATGAA CGTAGGTAAC CCAGATCGCG CGTTCGACTT CGCTCGTCTT
CCAAATGCAG GCGTAGGCCT TGCGCGTCTT GAATTTATTA TCAACCGCAT GATTGGCGTT
CACCCGAAAG CATTGCTTAA TTTCGACAGT CAGCCTGAAG AGCTGAAAGA AGAAATTAGC
GACATGATTG CAGGCTACGC GTCGCCAACG GAATACTACA TTGAGAAGCT AGTGGAAGGT
ATTTCAACCA TTGGTGCGGC GTTCTCACCT GAAAAAGTTA TCGTTCGTAT GTCAGATTTT
AAATCTAACG AATACTTTAA CTTAGTTGGC GGTTACCAAT ACGAGCCAGA CGAAGAGAAC
CCTATGCTAG GTTTCCGTGG CGCTAGCCGT TACATATCTG AAGACTTCCG CGACTGCTTC
GCCCTTGAAT GTGAAGCCAT AAAGCGCGTA CGCAATGATA TGGGCCTTAC TAACGTAGAA
ATTATGATTC CGTTTGTGCG TACGTTAGAT GAAGGGCGTC AGGTTATCGA ATTGCTTGAA
GAGCAAGGCT TGAAGAAAGG CGAAAACGGC CTTCGCGTTA TTATGATGTG TGAGCTTCCT
TCCAATGCGT TACTTGCTGA CAAGTTCCTC AATATTTTCG ACGGTTTTTC TATAGGCTCT
AATGACTTAA CCCAGCTTAC ATTAGGGTTA GACCGAGACA GTGGCGTGAT TGCCCACCTA
TTCGATGAGC GAGATGAAGC GGTTAAAGCA CTGCTTTCAA TGGCAATTCA AGCTGCGAAG
AAGCGTGGTA AATACGTGGG TATTTGTGGC CAAGGGCCGT CTGACCATGA AGATTTCGCA
GCTTGGTTGG TAGAAGAAGG TATCGATTCG GTATCGCTTA ACCCCGATAC TGTGGTTGAG
ACATGGCTAT ACCTTGCTGA AAAGCACGGC TAA
|
|---|
| Protein sequence | MQEYVLWYQE LGMHDVGRVG GKNASLGEMI SNLANAGVQV PGGFATTAEA FNEFLEQSGL
EARIHEVLDS LDVDDVNALA EAGKNIRQWI IDTPFQGKLE EEIKTAFVTL QGDAGEEASF
AVRSSATAED MPDASFAGQQ ETFLNVKGYE SVLVAIKHVF ASLFNDRAIS YRVHQGYDHK
GVALSAGIQR MVRSDIASSG VMFTIDTESG FEDVVFITSS FGLGEMVVQG AVNPDEFYVH
KPTLDKGLPA IVRRNLGSKL TKMIYSDDEA HGKQVSIVDI DAADSKTFSL NDDEVMELAK
QAQIIEKHYQ RPMDIEWAKD GVDGKLYIVQ ARPETVRSRE DSQSIERFQL KGQSNIVVEG
RAIGHKIGAG VAKVLDSIEE MDKIQAGDVL VTDMTDPDWE PIMKKASAIV TNRGGRTCHA
AIIARELGIP AVVGCGNATD SIKNGDKITV SCAEGDTGYI YGDELEFDVV TSRIDAMPDL
PLKVMMNVGN PDRAFDFARL PNAGVGLARL EFIINRMIGV HPKALLNFDS QPEELKEEIS
DMIAGYASPT EYYIEKLVEG ISTIGAAFSP EKVIVRMSDF KSNEYFNLVG GYQYEPDEEN
PMLGFRGASR YISEDFRDCF ALECEAIKRV RNDMGLTNVE IMIPFVRTLD EGRQVIELLE
EQGLKKGENG LRVIMMCELP SNALLADKFL NIFDGFSIGS NDLTQLTLGL DRDSGVIAHL
FDERDEAVKA LLSMAIQAAK KRGKYVGICG QGPSDHEDFA AWLVEEGIDS VSLNPDTVVE
TWLYLAEKHG
|
|---|
| |